Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02862 ATGAGAGTCGTGACTCCACAGGATGGTTTGCTCTTAAATCTACATGTTCTTATCTTTCTTGAATTTCTATGGTGGTGTATATTAACGAAGCAACTACAAAGATTAGCTGCTGTTGTCTTTCATGGGAAAAACTATGCTATAGTGATCTCTCCAACTGACTTGACACTGCTGCCTCTTACTATTTTACATTGGACCTGCTTCTACTGCAATTTAGTTTTTCGCTTCCAATGGTTTTCCTTGTCCTGCTCTTCAAAACCCCTCAGATCATATGCTAAAAAGTATAAACAAGGACTTCGATCAGGTGGATTTGACACAGCACATGCTGTAGCTAGGGCATATGGTCGAGCTGCGATCAAGTTCCGTGGCATTGATGCAGATATCAATTTCAACGTCAGCGATTATGATGAAGATATAAAGCAAAAAATATATGTAATTGATTGA 441 0.3878 MRVVTPQDGLLLNLHVLIFLEFLWWCILTKQLQRLAAVVFHGKNYAIVISPTDLTLLPLTILHWTCFYCNLVFRFQWFSLSCSSKPLRSYAKKYKQGLRSGGFDTAHAVARAYGRAAIKFRGIDADINFNVSDYDEDIKQKIYVID 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02862 146 Gene3D AP2/ERF domain 79 132 IPR036955 GO:0003700|GO:0006355
Aip10g02862 146 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 100 140 - -
Aip10g02862 146 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 100 140 - -
Aip10g02862 146 ProSiteProfiles AP2/ERF domain profile. 67 130 IPR001471 GO:0003700|GO:0006355
Aip10g02862 146 SUPERFAMILY DNA-binding domain 95 132 IPR016177 GO:0003677
Aip10g02862 146 SMART rav1_2 93 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02862 Aip-Chr10 122320526 122321739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02862 101 140 AP2-EREBP Transcription Factor Family AT2G39250 67.500 1.33e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02862 K09284 - pop:7465291 73.559