LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip10g02858	ATGAGGGCTAGTGGCCTATTACTGAAGTTTCTTGAGGCAATTCTCAAAGCTGGAAACCGGATGAATGCCGAAACTTCTAGGGGAAATGCACAAGGTTTCAACCTAAGTGCTCTTAGGAAGCTTCCTGATGTAAAAAGCATTGATGGGAAGACTAGTTTGCTACACTTCATTGTAGAGCAGGAAATGAAAGGGTTTGTAGAGGAATGTGAGGAGGAGCTTAAAGTTGTGAAAGATGAACACCTTAGGATCATGGAGCTTGTGAAGAAAACCAATGAGTATTATTTAGGAGGTAGAGGAGGATCAAACCCCTTTGAACTGTTTCTTATTGTGAGAGATCTTGTGCATGAAGAACCCCCTCACTCATCATAG	369	0.4201	MRASGLLLKFLEAILKAGNRMNAETSRGNAQGFNLSALRKLPDVKSIDGKTSLLHFIVEQEMKGFVEECEEELKVVKDEHLRIMELVKKTNEYYLGGRGGSNPFELFLIVRDLVHEEPPHSS	122

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip10g02858	122	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	1	122	IPR015425	-
	Aip10g02858	122	Gene3D	Formin, FH2 domain	1	59	IPR042201	-
	Aip10g02858	122	PANTHER	FORMIN-RELATED	60	114	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Aip10g02858	122	PANTHER	FORMIN-LIKE PROTEIN	1	60	-	-
	Aip10g02858	122	PANTHER	FORMIN-LIKE PROTEIN	60	114	-	-
	Aip10g02858	122	Gene3D	Formin, FH2 domain	60	116	IPR042201	-
	Aip10g02858	122	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	2	114	-	-
	Aip10g02858	122	PANTHER	FORMIN-RELATED	1	60	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Aip10g02858	122	Pfam	Formin Homology 2 Domain	2	59	IPR015425	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip10g02858	Aip-Chr10	122273654	122274340	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip10g02858	1	63	FH2 protein (formin) Gene Family	AT1G59910	71.429	5.05e-25	96.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip10g02858	-		-	aip:107618940	113.62

Showing 1 to 1 of 1 entries