Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02858 ATGAGGGCTAGTGGCCTATTACTGAAGTTTCTTGAGGCAATTCTCAAAGCTGGAAACCGGATGAATGCCGAAACTTCTAGGGGAAATGCACAAGGTTTCAACCTAAGTGCTCTTAGGAAGCTTCCTGATGTAAAAAGCATTGATGGGAAGACTAGTTTGCTACACTTCATTGTAGAGCAGGAAATGAAAGGGTTTGTAGAGGAATGTGAGGAGGAGCTTAAAGTTGTGAAAGATGAACACCTTAGGATCATGGAGCTTGTGAAGAAAACCAATGAGTATTATTTAGGAGGTAGAGGAGGATCAAACCCCTTTGAACTGTTTCTTATTGTGAGAGATCTTGTGCATGAAGAACCCCCTCACTCATCATAG 369 0.4201 MRASGLLLKFLEAILKAGNRMNAETSRGNAQGFNLSALRKLPDVKSIDGKTSLLHFIVEQEMKGFVEECEEELKVVKDEHLRIMELVKKTNEYYLGGRGGSNPFELFLIVRDLVHEEPPHSS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02858 122 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 122 IPR015425 -
Aip10g02858 122 Gene3D Formin, FH2 domain 1 59 IPR042201 -
Aip10g02858 122 PANTHER FORMIN-RELATED 60 114 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip10g02858 122 PANTHER FORMIN-LIKE PROTEIN 1 60 - -
Aip10g02858 122 PANTHER FORMIN-LIKE PROTEIN 60 114 - -
Aip10g02858 122 Gene3D Formin, FH2 domain 60 116 IPR042201 -
Aip10g02858 122 SUPERFAMILY Formin homology 2 domain (FH2 domain) 2 114 - -
Aip10g02858 122 PANTHER FORMIN-RELATED 1 60 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip10g02858 122 Pfam Formin Homology 2 Domain 2 59 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02858 Aip-Chr10 122273654 122274340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02858 1 63 FH2 protein (formin) Gene Family AT1G59910 71.429 5.05e-25 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02858 - - aip:107618940 113.62