Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02846 ATGATGATGGAAACAAAGGAAGAAGGCATGATAATAGAAGAGAACAAGAAGAAGAGCAATGAAAATGACAAGTTTACCCTGAAAGGATCGGCGGCGGCGTCGTCATCAACAAGGCAATGGTCGGCGTTTCGGAATCCAAGAATCGTGAGGGTATCAAGGTCATTTGGGGGAAAAGACAGGCACAGCAAGGTTTGCACCATAAGAGGGCTTCGTGACCGTCGGATCAGGCTCTCAGTCCCCACCGCCATTCAATTGTACGACTTGCAAGACAAGTTGGGACTCTCTCAACCAAGCAAAGTCATCGATTGGCTTCTTGATGCTACAAAGCTTGATATCGATAAGCTTCCCCCTCTTCACTTCCCTCAGCCCTGCTTCCAACCGCCGCAAACCCTATTCCCTCATCTTCTCCATGACCCTTCCTCTTTCTGGAAACCCAGGTTCTGGGAATTGGACTCTTCCGCTTCCTCCTCTTCTTCTTCCAGGTTTCTCAAAGGGAAGGACTTGATGACCACCATGCCTTCCGATAATAATAACAATAAAGCCAAGTGGATCTTCAAATCAAACAATGCAGATCATGAGAATCAAGAATTTGGAGGCGGTTACACTACTCAGAGACTTTTCCCAATGGAGACTCAGACTACTACTAATAATAATCCTTTTCAGAGTTTGTTCTTCAGCAACAACAACAACAACAACAACTCTACTCCTGAGGCTTCTAATTTGGGAAGCCATGGATTGTTGTTTCCTTCTAGTTCTTGTTCTTCTTCTTCTACAAGTCTTTATCATCACCATCATCAAGTGGGAGATTACTATGGCAGTTATCCAATGATGAATAACGGGGGTTTGATGCAATTGAACCATTTATCTTCTTTGCAAGTAGGCCCATCTGGTTCCTCACAATTATTGTTTGGTCCTTTATCTTCTGCTACTGCTGTTGCTGCTGCTACACCGCAGATTTTCACACCTTATGCACCATTTGTAACAACCCCATCATCTCTTCTGGAAGGTAGTAGTCATAATAATAATAATAATAATAATGGCGGTGGTGATTCAATAAAACAACAGCATCAATTCATCAATAGTCACATTCATCAGTTCTTGAACTCATCGTCCTCATCCACATCATCATCATCATCAACAAGCCTTCTTCTGATCGTAATGGAAGCCACCAACCAGATCATAATAATAAGGCTACTACTACTACTACTACTACTACTTCAGCTCGTTCTTGATTTCAGACTCGGGATTCTCATCTTCAATTGCTGCTACTACTACTACTATAATTCAAGAATGAATGTAGAGCAAATTTATATTCTGAGAAACCTAAGAGATGATGAACACATGCACCGCACCTTTGTAGTTCTTATGTGCTAA 1374 0.4214 MMMETKEEGMIIEENKKKSNENDKFTLKGSAAASSSTRQWSAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLDATKLDIDKLPPLHFPQPCFQPPQTLFPHLLHDPSSFWKPRFWELDSSASSSSSSRFLKGKDLMTTMPSDNNNNKAKWIFKSNNADHENQEFGGGYTTQRLFPMETQTTTNNNPFQSLFFSNNNNNNNSTPEASNLGSHGLLFPSSSCSSSSTSLYHHHHQVGDYYGSYPMMNNGGLMQLNHLSSLQVGPSGSSQLLFGPLSSATAVAAATPQIFTPYAPFVTTPSSLLEGSSHNNNNNNNGGGDSIKQQHQFINSHIHQFLNSSSSSTSSSSSTSLLLIVMEATNQIIIIRLLLLLLLLLQLVLDFRLGILIFNCCYYYYYNSRMNVEQIYILRNLRDDEHMHRTFVVLMC 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02846 457 PANTHER TRANSCRIPTION FACTOR TCP17 2 375 - -
Aip10g02846 457 Pfam TCP family transcription factor 57 175 IPR017887 -
Aip10g02846 457 ProSiteProfiles TCP domain profile. 57 115 IPR017887 -
Aip10g02846 457 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 375 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02846 Aip-Chr10 121490588 121492396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02846 41 209 TCP Transcription Factor Family AT5G60970 51.613 4.63e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip10g02846 TCP 2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02846 - - aip:107621125 676.781