Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02842 ATGAATGAGTATACACATCAGCTGCAGAATTCAACAGAGAACGATCCCTCCAACGACATCTTAGCCAGTGATGCATCAACACGTGGATCCATGGGAATCGGCAACCAACATGAAGGACCTGGGAATATCTCCAATTTTGAGCAAATGAAATCTGCAATATCAGTTACCAAGGTTCATAGTCCTGTGAATGGATCAAGTGAAGTGGCTAAAGTCCCCCTTGGCACAGGTTTTGAGAAATCTGCAGCTCCTCTAGCAGAAGGTTTTATTCGAAATGGGACTTCTGATCTTGTGGAAGCCATTGATGCTGATAGAGATTCTGGACAACTTATAAGGAGTGGCAGCCCAATAAAGCTACTTCAAGATTATGCTTCTGATGATACTTCAGGTAATGAAGATGAAATATCAGCAGGAGCTGGCAGTGGTGTTTCAATTGCGCATAAAGATTCCAGGAGTCGCTTAGAGACTGATATTGGATCCAAGAGTCCCTCCGGTACACAAAAGGGGTTTGGACAGCTCTCTGAAACAACTCTGGATAATTTAGTACAAACATCTAAGGAACCCATTGAAGATTACCATGAAAATCAGGTGTCTGTTGCTGCTTCCTATGAAACCATCGCAGTGAAAGATAAGTTAGGTAGTAAAAATAAATTTGGAAGGCATCCCAAAGAAGCTCCTACAGATAGTGACTCCGAGTCTGATGATTCTCACTATCGTCAGACTAAGAGGGGAAGCAAAAGAGGCAGAGGGAGGAGTCACAGCAGATCTCCTGAACACAGAAGTCGGAGTAGGAGTAGGAGGAGGAGAAAGAGTCCCCGGAGGAGAAGGGATAGAAGAAGCCGATCTCGAAGCCGGTCTCCACGATATCGTAGAAGCAGGAGTAGGTCTCCAATCTTAAGACGTACAGGGGACTTTGGTGGTGAGAATGTGAAAAGGGACAGGGGCCAATGCTTTGGCTTCGTTCGGGGGAAGTGCCATCGTGGAGCATCTTGTAGGTTCTCTCACCATGAATCTGACAAGAATGTTAGTTTGAGGCGCCATAGGAATAAATATGACCAAGAAGTCCATTCTCATGCAAAACATGTTAGTGATGGTATAAGAAGTCAGGGTGTGGATCAAAAGCAGGAGACAAATGAAAAAGAAAATTCTGTTAGTTTCAGAGAGACTGTTCTTGAAATGAAGGAAAGTTTGGTTGGTTTTCTTCCTGAAGTTTTAAGTGGTGATGATGCCTCTAAACCATGTGATGGCACAAATGAAGATGGTGTTCATGCAGAAGATAATTCATTTGTTCACAAGATACAACCCAATGTTCCTGTTGGAATTACAGAGCATCCTAGTTACTCATCTAGTATCCAAACTTTACCATATATGTTACCACCAACTCAGCCATTGTCTGCCCCTGGCTCTGTTGGTCCATCACCTTCATCAAGACGGCCTTTATTACATAGTAGTTCCTCGGTGGAATTACCACCTCATGCTTACCAGTTGCCTCCCCCACCTGTTGTTTCACATGCACAGGGTGAGAATGCTGTGAATTTGCCACAAATTTCAAGGGACTATGGTGTAACACAAAAAAATACATTATTCCCTTTTCAGCCCACTACTAGAGATAAATTTGAACCTTCCCCAGCTCTGATTCACATGCAGAGTCCTCACTTCAGTGTACCACTACCACCTAATTACCCTTGGACATCATTGCCGCTACCACCACCTCCTCCTCTCCCTTCACAAGTTGCACATAATCCCAGTATAAGTTCCGGAGTTTCAACATCATATGTCTCTTCAGAATTTAATCAAACTCAATTGCATTCAAGAGGGGACTTTGTTTCTCTGACTTCTGGTCCAAATGTTAGTGGAGAAGACCATTATAAGCAATTACCCATGCAAGATTCAAACCTTTCAAGCTCTGGTGGTTCACATCGTCTACAAAACCAATATTCCTGGCAGTCAGATGCTATCAGAATACAGCCTTCTGTTGGTGCGAATTTACCTCCAGAAGATCATTTCAAGACATCTTCCCACACACTTGCATCATCACAGAAGCAACAACCAGTGCATAGTTTTCAATATTCTGCATCTGAGGGTAATTTGGGTGTGCCTGGAGAAACTGTTACCTTATCTAGATATCCACCGGATGTTCTCGATAGCAATCATTCAACTTCTCTTCCAACTTTTGTGGGGTCAGGAATTCCTGCTCACTGTAATCCTTATGCTTCAACCTTTGAGCAGCCGCTTACTTCCAAACTCAGTTCAACTATTTTTAGACAAGAAAGTGATGTAATCCATGGAGACAATAATTCTGGGTTGAACCCTATTTCTATAAATAGGGAAGGCGCCGTTGGTGTTGAACCAAAGTCTTCTAGAGCTAATCAGTATGATCCTCTGTTTGACAGCATTGAACCACCATTGTCTTCTCTCAAGAAATTTGATTTTGAAAAACAGGAAGTTACAGGTGAATCCAATGTCAGCCTAAGGCCCAAAAGTTCTAATATGCCGTTGGATGCGGAAGAGCAAAATAAGCATGAGGAGGTTGGAGCTGTTGCCTCTACCACTTCTCAAAATAATGATGAATATGGTGAGACTGCAGATGCAGAGGTGGATGATGTTGAAAATGAGAGCCTAAGTAATCATGTGGATGTTGCAAACATGACTCCAGGGGAGGTCGAGATTAATCAGACTAAGTCTCCAGGGAAGAGAAAGAAGAGCAAGGATTCTAGATCAATGAAGTTGTTCAAAGTTTCCATTGCAAATTTTGTTAAGGAGGTTTTGAAACCGTCATGGCGGCAGGGAAATATGAGTAAAGTTGCATTCAAAACAATTGTGAAAAAAACTGTTGACAAGGTGTCAGGAGCCATGAAAGGCCATCGTATGCCCAAGTCCCAAGCAAAGATAAGCCAATACATTGACTCATCACAGCGAAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTCAAGTCATAA 2967 0.426 MNEYTHQLQNSTENDPSNDILASDASTRGSMGIGNQHEGPGNISNFEQMKSAISVTKVHSPVNGSSEVAKVPLGTGFEKSAAPLAEGFIRNGTSDLVEAIDADRDSGQLIRSGSPIKLLQDYASDDTSGNEDEISAGAGSGVSIAHKDSRSRLETDIGSKSPSGTQKGFGQLSETTLDNLVQTSKEPIEDYHENQVSVAASYETIAVKDKLGSKNKFGRHPKEAPTDSDSESDDSHYRQTKRGSKRGRGRSHSRSPEHRSRSRSRRRRKSPRRRRDRRSRSRSRSPRYRRSRSRSPILRRTGDFGGENVKRDRGQCFGFVRGKCHRGASCRFSHHESDKNVSLRRHRNKYDQEVHSHAKHVSDGIRSQGVDQKQETNEKENSVSFRETVLEMKESLVGFLPEVLSGDDASKPCDGTNEDGVHAEDNSFVHKIQPNVPVGITEHPSYSSSIQTLPYMLPPTQPLSAPGSVGPSPSSRRPLLHSSSSVELPPHAYQLPPPPVVSHAQGENAVNLPQISRDYGVTQKNTLFPFQPTTRDKFEPSPALIHMQSPHFSVPLPPNYPWTSLPLPPPPPLPSQVAHNPSISSGVSTSYVSSEFNQTQLHSRGDFVSLTSGPNVSGEDHYKQLPMQDSNLSSSGGSHRLQNQYSWQSDAIRIQPSVGANLPPEDHFKTSSHTLASSQKQQPVHSFQYSASEGNLGVPGETVTLSRYPPDVLDSNHSTSLPTFVGSGIPAHCNPYASTFEQPLTSKLSSTIFRQESDVIHGDNNSGLNPISINREGAVGVEPKSSRANQYDPLFDSIEPPLSSLKKFDFEKQEVTGESNVSLRPKSSNMPLDAEEQNKHEEVGAVASTTSQNNDEYGETADAEVDDVENESLSNHVDVANMTPGEVEINQTKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRMPKSQAKISQYIDSSQRKLTKLVMGYVDKYVKS 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02842 988 MobiDBLite consensus disorder prediction 209 240 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 209 311 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 884 905 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 457 490 - -
Aip10g02842 988 ProSiteProfiles Zinc finger C3H1-type profile. 310 337 IPR000571 GO:0046872
Aip10g02842 988 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 27 987 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 467 482 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 605 641 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 660 681 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 1 45 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 355 383 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 156 183 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 241 295 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 667 681 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 122 188 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 843 858 - -
Aip10g02842 988 PANTHER EXPRESSED PROTEIN 27 987 - -
Aip10g02842 988 MobiDBLite consensus disorder prediction 815 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02842 Aip-Chr10 121304678 121308888 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aip10g02842 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02842 - - aip:107622644 1734.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02842 10 121304678 121308888 Aip10g02842 10 121304678 121308888 ECH