Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02839 ATGGAGTCTATGTTGTTGTCGTCAATCTCAGCATTACTTCTGTTACTGCTCTCTTGCTTCACATTCACTTCTACAGATGCCTATGATGCACTTGATCCAACCGGTAACATAACGATCAAATGGGACGTCATTAGCTGGACTCCAGATGGCTATGTTGCTGTGGTATCAATGTACAATTTCCAACAGTATCGCCATATTCAGGCGCCGGGGTGGTCGTTAGGGTGGTCGTGGGCCAAGAAAGAAGTAATATGGAACATGATGGGAGGGCAGACCACAGAGCAAGGAGACTGCTCAAAGTTCAAAGCAGGCCAACCACATTGCTGTAAAAAGGACCCCCTAGTCGTTGACTTGCTCCCGGGGACTCCTTACAACCAACAGATCGCCAATTGCTGCAAAGGGGGTGTCCTGAGTTCGTGGGCTCAGGACCCCAGCAATGCTGTTAGCTCATTCCAGGTCAGCGTTGGTTCGGCCGGAACAACTAACAGAACGGTCAAGTTGCCGCGAAACTTTACCCTCAAGGCACCTGGTCCTGGATACACTTGTGGCCCTGCAAAGATTGTTAGGCCAACTAAATTTGTTACTAGTGACAAAAGGAGAACCACCCAAGCCTTAATGACTTGGAATGTTACCTGCACATACTCTCAATTCCTGGCTCAAAAGACACCAACTTGTTGTGTTTCCCTGTCATCCTTCTACAATGACACAATAGTAAACTGTCCAACTTGCACCTGCGGCTGCCGGAACAAAACAGCGCCCGGAAGCTGCGTAGATCCAGACTCTACACATTTAGCTTCAGTTGTATCAGGGAAGCCTACGGATACGCCTCTTGTCCAGTGCTCCAGCCACATGTGTCCGATTCGAGTGCATTGGCATGTGAAGCTAAATTACAAGGAGTACTGGAGGATCAAGATCACAATCACAAATTTCAACTACAGAATGAACTACACACAATGGAACCTTGTCGTGCAGCACCCGAATTTTGATAATCTAACTGAGTACTTCAGCTTTAATTACAAGCCACTAATGCCTTATGAAGGCTTAAATGATACTGCTATGCTATGGGGAGTGAAGTTCTACAATGATTTTCTATCTTCAGCTGGACCCCTTGGTAATGTGCAATCAGAACTCTTGTTTAAAAAGGACAAAGAAACCTTCACTTTTGATAAGGGATGGGCTTTCCCAAGAAGGATCTATTTCAATGGAGATAATTGTGTTATGCCTCCTCCTGATGCATATCCTTGGCTTCCAAATTCAAGTTCAAGACTAGTTTTCTCTTTACTAGGCACTTTCATCATAGCCAGGTGA 1305 0.4567 MESMLLSSISALLLLLLSCFTFTSTDAYDALDPTGNITIKWDVISWTPDGYVAVVSMYNFQQYRHIQAPGWSLGWSWAKKEVIWNMMGGQTTEQGDCSKFKAGQPHCCKKDPLVVDLLPGTPYNQQIANCCKGGVLSSWAQDPSNAVSSFQVSVGSAGTTNRTVKLPRNFTLKAPGPGYTCGPAKIVRPTKFVTSDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCRNKTAPGSCVDPDSTHLASVVSGKPTDTPLVQCSSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYTQWNLVVQHPNFDNLTEYFSFNYKPLMPYEGLNDTAMLWGVKFYNDFLSSAGPLGNVQSELLFKKDKETFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNSSSRLVFSLLGTFIIAR 434
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02839 434 PANTHER COBRA-LIKE PROTEIN 7 430 - -
Aip10g02839 434 PIRSF COBRA 1 433 IPR006918 GO:0010215|GO:0031225
Aip10g02839 434 PANTHER PROTEIN COBRA 7 430 IPR006918 GO:0010215|GO:0031225
Aip10g02839 434 Pfam COBRA-like protein 51 214 IPR006918 GO:0010215|GO:0031225
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip10g02839 Aip-Chr10 121227840 121231057 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02839 2 421 COBRA Gene Family AT3G02210 72.813 0.0 686
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02839 - - gmx:100815779 801.586
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02839 10 121227840 121231057 Aip10g02839 10 121227840 121231057 ECH