Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02838 ATGGAATTTGATAATGGTGACAAGCGGCGGCGAAGCTGCGAATTCCGAGAGCTCAAGGTGGTTATCTTGGCTGCTATATGCTTTATGATACTTTCTCAAGCAGATGCATTTGATCCATTGGATCCAACTGGGAATGTGACAATAAGATGGGATATCATGTCCTGGACAACAGATGGCTATATGGCCACTGTGACAGTGTTCAACTTTCAACAATACAGGACAATCATGAACCCTGGATGGACAATAGGGTGGACATGGGCAAAGAAAGAGATAATATGGACAGTGATGGGAGCTCAAGCAACAGAACAAGGTGATTGTTCCAAGTTCAAGTTGAAGATCCCTCACAGCTGCAAGAGGAACCCTCAGGTTGTTGACTTAATGCCTGGAGCACCTTTCAACATGCAGTTCAATAACTGCTGCAAAGGTGGTGTCCTAACTTCTTGGGGTCAGGACCCTTCCGGTGCTGTCTCGGCTTTTCAGATAGGTGTAGGCCTCTCTGGCACCTCTAACAAGACAGTTAAGCTTCCCAAGAACTTCAAGCTTCTCGGTCCGGGGCCAGGCTATTCCTGTGGCCCTGCTAAGCTTGTGCCTGCCACTGTCATCCCAACCGATGATCGTAGGAGAAAAGCTCAAGCTTTGATGTCTTGGAATGTGACATGCACTTATTCGCAGTTTCTAGCCTCCAAGAATCCAAGTTGTTGTGTTTCTTTGTCATCTTTCTATAGTGACAAAGTCACAGCTTGTCCAACCTGTGCTTGTGGTTGTCAAAATAATGATACCTGTGTCACGAAGGACTCAAAGTTACTACAAGAAGATGAGAGAGTAAAGACTAAGAAGAGTGATATGACACCAAAACCATTGCTACAATGCACACACCACCTTTGTCATGTGAGGGTGCATTGGCACATCAAAGACAACTACCAAGATTATTGGAGGGTCAAGATTGCCATCATCAACTTCGACTATCGACTCAATTACACTCTATGGAACCTTGTTATTCAACACCCCAATCTCAACAATGTCACACAAGTCTATAGCTTTGAATACATGCCACTTCTTCCCTATGAAGCCATAAATGACACAGGAATGTTCTATGGTTTGAAGTACTACAATGATCTATTGATGGAAAATGGGCCTAAAGGGAATGTGCAATCTGAGATTCTTATGAAGAAGGACAAGAACACATTCACACTCAAGCATGGATGGGCATTTCCAAGGAGGGTCTACTTCAATGGTGAAGAATGCATGCTGCCACCTCCTGATTCATACCCTTTCTTGCCAAACTCTGCTCATAGACTACTGATTAGTGCTTCGTCGATAGTAGCCAGCACCATTTTCGCATCATTTTTTCATTTGGTTATGATTCTTTTATGA 1374 0.4381 MEFDNGDKRRRSCEFRELKVVILAAICFMILSQADAFDPLDPTGNVTIRWDIMSWTTDGYMATVTVFNFQQYRTIMNPGWTIGWTWAKKEIIWTVMGAQATEQGDCSKFKLKIPHSCKRNPQVVDLMPGAPFNMQFNNCCKGGVLTSWGQDPSGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKLVPATVIPTDDRRRKAQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTACPTCACGCQNNDTCVTKDSKLLQEDERVKTKKSDMTPKPLLQCTHHLCHVRVHWHIKDNYQDYWRVKIAIINFDYRLNYTLWNLVIQHPNLNNVTQVYSFEYMPLLPYEAINDTGMFYGLKYYNDLLMENGPKGNVQSEILMKKDKNTFTLKHGWAFPRRVYFNGEECMLPPPDSYPFLPNSAHRLLISASSIVASTIFASFFHLVMILL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02838 457 PANTHER PROTEIN COBRA 1 456 IPR006918 GO:0010215|GO:0031225
Aip10g02838 457 PIRSF COBRA 11 456 IPR006918 GO:0010215|GO:0031225
Aip10g02838 457 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
Aip10g02838 457 PANTHER COBRA-LIKE PROTEIN 1 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02838 Aip-Chr10 121225124 121227681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02838 12 451 COBRA Gene Family AT3G02210 56.433 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02838 - - gmx:100813134 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02838 10 121225124 121227681 Aip10g02838 10 121225124 121227681 ECH