Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02835 ATGTCCCATTCGCTTGTGCCAAAGATCAATACTACTCTTCTCTTGGGTTTGACATGCTGTGAATTTGCGAACACCATAGTACATGTAGAGCCCATCTCTTCGTTCACCCGCTCCAATCAGCATCCTCAAAATGAGGTCCTGCATAGCACAAAGCTCATGATCGAAAAACCGGTCACCCTAACCCTCACGGCCTCACCTCTGTTTTGTCTTCTGCCTCTTCTCGTGCTTTCTTATTCCGTTCGCCTTCGCCCTGAGCCACCGTCGCCGTGCTCGGCTTGGCCGTCTGCCTCTGCGTATTCTGGTCAATCTGTTTCTGAGATGGAAAGCAGCAGCAACAACCAGTGGAGTGCTGAGGAAGCCATTGGTGGCAATGCCCAACCTCTTCAAGCACTCAGAGAAATCATCATCTTCCCGCGCCTATTTTCTCGACAAGCGCAGAGCCTTGGCCTCAAATGGCCACGGGGATTGCTGCTCTATGGCCCACCAGGCACTGGAAAGACGAGTTTGGTTCGAGCAGTGGTTCGGGAATGTGGGGCGCATTTGAAAATTATTAGTCCGCACATGGTGCACAGAGCACATGCCGGTGAAAGTGAGAAAATTCTCCGAGAGGCTTTTGCTGAGGCAGCATCTCAAGTAGCTTTGGGCAAGTCATCAGTTATCTTTATAGATGAAATAGATGCACTCTGTCCCCGTCGAGATTCTAAGTATCTGTATACAAAAAAGATTCCATTGGATCCCAATGTTAACATAAAAATCATTGCTGCATCATGCAATGGATATGTTGGAGCTGATTTGGAGGCATTGTGTCGTGAAGCTACCATGTTTGCAATTAAAAGGTCAAATACAAATGAAGATGCTATTAATTTCAGTTTAACAATGGAAGATTGGCAAAACGCAAGGTCCATTGTTGGTCCAAGTATAACAAGAGGTGTTACTGTTGAAGTTCCCAAAGTGACTTGGGAAGACATTGGGGGATTAAAAGATTTGAAGAAAAAACTTCAGCAAGCTGTCGAATGGCCTATTAAGCATTCTGATGCATTTTCAAGATTGGGAATATCTCCCGTACGTGGAATTCTTCTCCATGGACCTCCAGGATGCTCAAAAACAACCCTTGCTAAAGCTGCTGCTCATGCTGCCCAAGCTTCTTTCTTTTCTTTGAGTGGTGCAGAATTGTATTCAATGTATGTTGGAGAGGGGGAAGCTCTGCTCCGTAACACATTTCAGAGAGCCCGACTCGCGGCACCCAGTATAATATTCTTTGATGAGGCTGATGTTGTAGCTACAAAACGAGGTGATAGTTCAAGCAATAGTGCGACAGTTGGTGAGAGGCTTTTATCCACTTTGTTGACTGAGATTGATGGCTTAGAAGAAGCTAAAGGAATTCTTGTTCTGGCAGCAACAAATCGCCCTTACGCGATTGACGCTGCACTCATGCGTCCAGGACGTTTTGATCTGGTTCTTTATGTGCCACCGCCTGATTTGGAGGCTCGATATGAGATACTTTGTGTCCATACGCGTAATATGAAAACCGCGAGTGACGTCAATCTCAGACTACTAGCAGAAGACACTGAACTCTTTACAGGAGCTGAACTGGAGGGGTTATGCAGGGAAGCTGGAATTGTGGCTCTAAGGGAAGACATATCCGCCACCGTTGTATGCGATCGTCATTTCCAGATAGTGAAAGATTCTGTAAACCCAGCACTAACAAAAGCTGAAATTGATTCATACTCATCTTTTATGAAGACCTCATCTCAAGCTTTTCCTAAACATTTTGATTCAGATATGGAATTAGATAGGAGCAAAAAGAATGGGTTCAATCCTATGTCTTTGGTTAAAATTAGTGTTGCCAGTTTTGTATTACTTGCTGCTGCTAAATACTATAACATAGGTGGAGACCAAATTGTACCTCATACACCAATGACCTGA 1926 0.4481 MSHSLVPKINTTLLLGLTCCEFANTIVHVEPISSFTRSNQHPQNEVLHSTKLMIEKPVTLTLTASPLFCLLPLLVLSYSVRLRPEPPSPCSAWPSASAYSGQSVSEMESSSNNQWSAEEAIGGNAQPLQALREIIIFPRLFSRQAQSLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLKIISPHMVHRAHAGESEKILREAFAEAASQVALGKSSVIFIDEIDALCPRRDSKYLYTKKIPLDPNVNIKIIAASCNGYVGADLEALCREATMFAIKRSNTNEDAINFSLTMEDWQNARSIVGPSITRGVTVEVPKVTWEDIGGLKDLKKKLQQAVEWPIKHSDAFSRLGISPVRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSMYVGEGEALLRNTFQRARLAAPSIIFFDEADVVATKRGDSSSNSATVGERLLSTLLTEIDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARYEILCVHTRNMKTASDVNLRLLAEDTELFTGAELEGLCREAGIVALREDISATVVCDRHFQIVKDSVNPALTKAEIDSYSSFMKTSSQAFPKHFDSDMELDRSKKNGFNPMSLVKISVASFVLLAAAKYYNIGGDQIVPHTPMT 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02835 641 Pfam AAA+ lid domain 247 295 IPR041569 -
Aip10g02835 641 Pfam AAA+ lid domain 513 558 IPR041569 -
Aip10g02835 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 316 575 IPR027417 -
Aip10g02835 641 Gene3D - 239 307 - -
Aip10g02835 641 Gene3D - 308 492 IPR027417 -
Aip10g02835 641 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 110 233 - -
Aip10g02835 641 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 237 562 - -
Aip10g02835 641 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 160 179 - -
Aip10g02835 641 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 439 458 - -
Aip10g02835 641 PANTHER AAA-FAMILY ATPASE 110 233 - -
Aip10g02835 641 SMART AAA_5 354 493 IPR003593 -
Aip10g02835 641 SMART AAA_5 152 281 IPR003593 -
Aip10g02835 641 Gene3D - 120 235 IPR027417 -
Aip10g02835 641 Pfam ATPase family associated with various cellular activities (AAA) 358 490 IPR003959 GO:0005524|GO:0016887
Aip10g02835 641 Pfam ATPase family associated with various cellular activities (AAA) 156 232 IPR003959 GO:0005524|GO:0016887
Aip10g02835 641 ProSitePatterns AAA-protein family signature. 461 479 IPR003960 GO:0005524|GO:0016887
Aip10g02835 641 PANTHER AAA-FAMILY ATPASE 237 562 - -
Aip10g02835 641 Gene3D - 493 584 - -
Aip10g02835 641 CDD AAA 324 491 - -
Aip10g02835 641 CDD AAA 153 268 - -
Aip10g02835 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 305 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02835 Aip-Chr10 121181241 121188102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02835 289 594 Calmodulin-binding Proteins AT3G56690 45.752 3.59e-82 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02835 - - adu:107470970 763.837