Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02812 ATGGGCAAGACAATCAGTTTGTCACTGGATGAAAGTGAATCTAAGTTAGGCCTTTCAAACAATGATGTTGTTGACAAGGATGACTTAGAAAAGGCTGAGTTGTTGTCAAATGAGGATGGTCGTGAATATGAAGACATGACTGGGTTGAGTGCAAAGGATATAATGAAAAATGTGTTTCGAAGTGAAGAGCATGCGAATGAGTTTTATTTGAAGGTAGGAAAATGCAAGAGATTTGGGGTCCGTAAGGGAGACTATGCGAAGGATGAAGATGGGACTATAGTGAGAAAAAGGTTCTTCTATAACAGGGCTGACCTAAGGGATGAAAAGCACTACAACAAATTAGATAGGAAGAGATCTCATAGGCCTGAGACACGCACAAATTGCCAGGCCCTTATGTCTGTATACCTTGATAAGGGGAGCTCAATTTGGAAGGTTCGAAAAGTAATCCTCGAGCATAACCATGAATTGATGCATAGGGGAATGATTCACATGATCCGAAGTTTCTGGGCAATATCTAGTTCCGCAAAGGCCCACATGGATGGAATGCATGCGTATGGCTTGCCAACGTCTAAGATATTAGGGTACATGGCTGGGATTGTGGGTGGTTATTCTTGTTTGGGTTTTACCAAGAAGGACGCATACAACTATATTGATCGTTCGAAGCATGCAAAGGTTGTTGATGGAGACATGAACGCTGCTATAGTCTACCTGGAAGGCAAGGCAGCTGCTGATCCTATGTCTATCGCCCGGTACAATTTGACTGAAGAAGGTATGTTGGCAAACATGTTTTGGGAAAATGGTCCTAGCAGGGTTGATTTTCAACACTTCGGGGACGTGGTTGCATTCGATTCGACATATAAGAAGAACAAATACAACATACCTCTTGTCATATTCTTCGGTTCAAACAACCATAAGCAAACAATAAGTTTTTGTTTTGGTTTGGTTTTAGATGAGACAATCGATTCATACAGGCAAGTATTGCCCCGGGCAACCCATAGGTTGTGTGTACGGCATCTGCAGAAGAATGTGACCTCAAACACCAACCAGCAGATGTTCTATGACGTCTTTGCCAGGTGGTTGTGTGGAAACATGGAAGTTGAAGAGTTTGAGGGGGAATTGGCACAGGTTGCTAACCATATGGGTTACTCAATAAGTATTGGGCATTACAGCTGTACAAAAGAGGAAGATGTGGGCAAATGCGTACTTGTGTCGCAAGTTTTGCGTAAGGTTCCGCAAGACCTCTCGTTGGGGAGGTTGGATGTCGATGTGGATTTTGGGAGAAAGAAGGTTTTCCATGCATGCATATGTTTTTTTGTCATGAAGCACGAGCATGTAAAAAGAATTTCCGAGCGGTTGATATTAAGACGATGGAGGAAGGATGTGAAGACAATCAAAGAATACATTGAGAAGACAGAAGACGCTAATGAGCGAGGTTTCTTGTTGAGACATGGTGCCCTACATGTTGCTTCACAGTGGATGTTGTTCGTTGGATCTAAGAACGATGAACTCTACGAGAAATGCATGAGCAGAATCAGGCAGATATACTGTGATCTTCAAGCATGCAGCAGCAATAATACGATGGATAAGAGTCCGAAGGCGGCCTGTGATGTACGAGATCCAGCTGTTGCTGTTTTGCCGAATCTTTATTTGCATGTTGATCAAGACAAGGGGTTAAATGAGGAAGACAATTGGCGCAGGGAGGAGAATGACAGAGCGAATGACAGATGA 1728 0.4311 MGKTISLSLDESESKLGLSNNDVVDKDDLEKAELLSNEDGREYEDMTGLSAKDIMKNVFRSEEHANEFYLKVGKCKRFGVRKGDYAKDEDGTIVRKRFFYNRADLRDEKHYNKLDRKRSHRPETRTNCQALMSVYLDKGSSIWKVRKVILEHNHELMHRGMIHMIRSFWAISSSAKAHMDGMHAYGLPTSKILGYMAGIVGGYSCLGFTKKDAYNYIDRSKHAKVVDGDMNAAIVYLEGKAAADPMSIARYNLTEEGMLANMFWENGPSRVDFQHFGDVVAFDSTYKKNKYNIPLVIFFGSNNHKQTISFCFGLVLDETIDSYRQVLPRATHRLCVRHLQKNVTSNTNQQMFYDVFARWLCGNMEVEEFEGELAQVANHMGYSISIGHYSCTKEEDVGKCVLVSQVLRKVPQDLSLGRLDVDVDFGRKKVFHACICFFVMKHEHVKRISERLILRRWRKDVKTIKEYIEKTEDANERGFLLRHGALHVASQWMLFVGSKNDELYEKCMSRIRQIYCDLQACSSNNTMDKSPKAACDVRDPAVAVLPNLYLHVDQDKGLNEEDNWRREENDRANDR 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02812 575 PANTHER OS02G0262500 PROTEIN 52 325 - -
Aip10g02812 575 Pfam MULE transposase domain 279 326 IPR018289 -
Aip10g02812 575 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 52 325 IPR031052 GO:0006355
Aip10g02812 575 Pfam FAR1 DNA-binding domain 67 157 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02812 Aip-Chr10 120467172 120469605 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02812 FAR1 4.5e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02812 - - aip:107633916 545.814