Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02811 ATGATCTCCTCTGGCAGGTTCTCCTCCGGCGTCGCGTTCTCCTCCTGCTATAATCTCCGTTGTTTCCTCCAACGATCTTCTCCAGCAGCGATCTTCTCCGGTGGTGATCTCCTCCATCAATGCATCTCTTCCATTAATGAGATCTGTTGCGCAAGTGTTTCCTGCGGCATCGAGTTGTGTTCTGCGACTTCTCCATCTCCATCGAGCTTCGTTGAGCATCTAGGTTTTCGATTTTCTTCACTGTCAGAAGAAATTGGAGGACGTGAAGCAGCTACAAGAATCAAATTCGGGGATGGAAACTCGTACGGAGTCTCAAAAGCACTGAGTAGGTTGGTGCTGCTTGAAGTGGAGGCAAGAGTGTCTGAGAAGAACGTCCTCATTCGGATCCACTGTGAGAAACACAAAGGAGTGTTGATGTACATTCTCAAGCTCATTGACAAACTCCATCTCTCTGTTCTTAACACCACTTCCTTGCCTTTTGGAACCTCCATTGTTGACATAACCATCACTGCCAAGGTGATTAATGTTTCGTCACCCAATACTCCTGGCTTGCGCATGCTTCAAGGAAGAAAGCAATTGAAGGATCTTGTGAAGAAGGTACAAGCTGCTTATTTGTCAAAAGACGACCTTGAAGACATTGCTGCAATTATATCAAATACAACCATTTCCAGACCAGATACTGTTAGTAGCAATCCATTAGCTTCAGAAGCTGGTGGGTTGAGTGGGAAGCCTCTTCTTGATCTCTCTACCAATATCTTGAAGCAGATGTATATCTTGACACAGGGCAAGATTCCTTTAATTGGCTGTGGGGGCATTAGCAGTGGTGAGGATGCATACAAGAAAATAAGATCTGGAGCAACTCTTGTTCAGCTATATACTGCTTTCGCTTATGGGGGACCTGCACTTATTCCACAAATGAAGGTGGCTGCTCTTGTTCCTAAAGGGGAGCTTGATGGTGAAATGGGGGATGCACACATGGCAATGCAGGCTAGGTTGATGAGCCAGACCCTTTAG 1014 0.4596 MISSGRFSSGVAFSSCYNLRCFLQRSSPAAIFSGGDLLHQCISSINEICCASVSCGIELCSATSPSPSSFVEHLGFRFSSLSEEIGGREAATRIKFGDGNSYGVSKALSRLVLLEVEARVSEKNVLIRIHCEKHKGVLMYILKLIDKLHLSVLNTTSLPFGTSIVDITITAKVINVSSPNTPGLRMLQGRKQLKDLVKKVQAAYLSKDDLEDIAAIISNTTISRPDTVSSNPLASEAGGLSGKPLLDLSTNILKQMYILTQGKIPLIGCGGISSGEDAYKKIRSGATLVQLYTAFAYGGPALIPQMKVAALVPKGELDGEMGDAHMAMQARLMSQTL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02811 337 PANTHER DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATED 215 313 - -
Aip10g02811 337 PANTHER DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATED 172 204 - -
Aip10g02811 337 ProSitePatterns Dihydroorotate dehydrogenase signature 2. 266 286 IPR001295 GO:0006207|GO:0016627
Aip10g02811 337 Gene3D Aldolase class I 214 312 IPR013785 -
Aip10g02811 337 Gene3D Aldolase class I 95 213 IPR013785 -
Aip10g02811 337 PANTHER DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL 215 313 - -
Aip10g02811 337 PANTHER DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL 172 204 - -
Aip10g02811 337 SUPERFAMILY FMN-linked oxidoreductases 170 306 - -
Aip10g02811 337 Pfam recA bacterial DNA recombination protein 307 337 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip10g02811 337 Pfam Dihydroorotate dehydrogenase 199 307 IPR005720 GO:0005737|GO:0016627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02811 Aip-Chr10 120455301 120457956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02811 116 175 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 50.000 2.73e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02811 K00254 - ahf:112783071 250.751