Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02801 ATGAACCACTCTTCAGCAGATCATGATCGGGATCAGTACCTAAAGAAGCGAAAATCCAGTGCTGATTCCTCGTCAAGCATGAGGAAATCCAGCGCAAGGAGAAGATTCAGCAGCAGCAAGAATTCGAACAACAACGACGACAACAAAGGCGGTGGAGGCGGAGGCGGAGGCGTGTCGACGACGCTGAAGCTGTACGACGATCCATGGAAAATAAAGAAGACGTTAACGGACAGCGACCTCGGGATCCTGAGCAGGCTGTTGCTGGCAGCTGATTTGGTGAAGAAGCAGATCCTTCCGATGCTGGGCGGCGATGACGCTCGAGCGGCGGAGACGGAAGAAGGAACTCCGGTGAGAGTGTGGGACATGGACACCAGATCCATGCACCACTTGGTCCTGAAGCGTTGGTCATCTTCCAAAAGCTATGTTCTTATTGGAAAATGGAATCAAGATTTCGTCAGAAGACGGGACCTCAAGAAAGGTGATGAGATTGGCTTCCACTGGGATCCCTATAACTGCGCCTTCAACTTCTGCGTTCTTACACGCGCCTCCTCCTCCTCCTCCACCTGA 567 0.5238 MNHSSADHDRDQYLKKRKSSADSSSSMRKSSARRRFSSSKNSNNNDDNKGGGGGGGGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGGDDARAAETEEGTPVRVWDMDTRSMHHLVLKRWSSSKSYVLIGKWNQDFVRRRDLKKGDEIGFHWDPYNCAFNFCVLTRASSSSST 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02801 188 CDD B3_DNA 69 179 IPR003340 GO:0003677
Aip10g02801 188 Gene3D - 68 186 IPR015300 -
Aip10g02801 188 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 15 182 - -
Aip10g02801 188 MobiDBLite consensus disorder prediction 1 58 - -
Aip10g02801 188 SUPERFAMILY DNA-binding pseudobarrel domain 67 178 IPR015300 -
Aip10g02801 188 MobiDBLite consensus disorder prediction 1 23 - -
Aip10g02801 188 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 15 182 - -
Aip10g02801 188 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02801 Aip-Chr10 120112584 120113150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02801 51 172 RAV Transcription Factor Family AT1G51120 36.000 1.48e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02801 - - pvu:PHAVU_009G204600g 249.595