Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02799 ATGGGGTGCTCCTTCTCTGGTCTGAACGCCTTATACGACGCCGTTAGCGGCGGAGCCGACGTTTGGATCAACGAGAATCGCTTCCGCGTCGTCCGGCAGCTCGGCGAAGGTGGATTCGCCTACGTTTACTTGGTCAAAGAAGTTCCCGCTGACTCTTCTTCTCTCACTGGCCTCGCCAACAAGCTCAAGAATCCCTCTCTTCTCTCCGGTGATGGAACTTATGCAATGAAAAAGGTTCTTATTCAGAATAGTGAGCAATTGGCATTGGTGAAGGAAGAGATCCGTGTTTCTTCTCTTTTCAGTCATCCGAATCTGCTTCCACTTCTTGACCATGCAGTCATTTCAGTAAAGCCTACTCAAGAGACATCTTGGACCCATGAAGCTTACTTGCTATTTCCTGTTCATTTGGATGGAACATTGTTTGACAATGCTAATACAATGAAAGCCAAGAAGGAGTTCTATTCTACCACAGATGTTCTTCAAATATTTAGTCAGCTTTGTGCAGGACTCAAGCATATGCATGGTTTAGATCCTCCATATGCACATAATGATGTCAAACCAGGCAATGAGTGGGCGGCTGAACACTGCTCTGCCCCTTACCGAGCTCCTGAGCTGTGGGATTGCCCAAGCCAAGCTGATATTGACGAGAGGACTGATATTTGGTCACTTGGATGCACACTGTACGCGATTATGTATGGGGTATCTCCATTTGAATATGCACTTGGCGAGTCCGGCGGGAGCCTGCAACTGGCTGTTGTAAATGCTCAGGTGAAATGGCCAGCTGGACCTAAGCCTCCGTATCCAGAGGCGCTGCATCAGTTTGTGACTTGGATGCTTCAGCCTCAGGCCACCGTTCGTCCACGAATAGATGATATCATTATCCATGTTGACAAGTTGATCTCGAAGTTCTCTCCTTGA 918 0.4793 MGCSFSGLNALYDAVSGGADVWINENRFRVVRQLGEGGFAYVYLVKEVPADSSSLTGLANKLKNPSLLSGDGTYAMKKVLIQNSEQLALVKEEIRVSSLFSHPNLLPLLDHAVISVKPTQETSWTHEAYLLFPVHLDGTLFDNANTMKAKKEFYSTTDVLQIFSQLCAGLKHMHGLDPPYAHNDVKPGNEWAAEHCSAPYRAPELWDCPSQADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVVNAQVKWPAGPKPPYPEALHQFVTWMLQPQATVRPRIDDIIIHVDKLISKFSP 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02799 305 PANTHER - 190 304 - -
Aip10g02799 305 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 189 - -
Aip10g02799 305 Pfam Protein kinase domain 195 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02799 305 ProSiteProfiles Protein kinase domain profile. 28 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02799 305 Gene3D Transferase(Phosphotransferase) domain 1 191 305 - -
Aip10g02799 305 SUPERFAMILY Protein kinase-like (PK-like) 20 295 IPR011009 -
Aip10g02799 305 SMART serkin_6 28 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02799 305 Gene3D Transferase(Phosphotransferase) domain 1 14 190 - -
Aip10g02799 305 PANTHER - 1 189 - -
Aip10g02799 305 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 190 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02799 Aip-Chr10 120091787 120095232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02799 33 295 EF-hand Containing Proteins AT4G04710 23.746 3.74e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Aip10g02799 Pkinase 4.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02799 K08856 - gmx:100810160 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02799 10 120091787 120095232 Aip10g02799 10 120091787 120095232 ECH