Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02760 ATGGCACATGAAAGAAAACACTATTGCTTCATCTTCTTCTTCTTCCTCCTTCTCAGTATGGTGTTTGCCACGCTGTCACGGGCAGACAACGATACTCAAATTCTTTTGCGGTTCAAGAACTCGTTGTCCGATGCCGGCGCCTTACAAAACTGGGACGAGTCAATCAATATTTGCAGCTGGACCGGCTTGTTATGCAAAGATGACAAACTTCATGGACTAAAGCTAGAAAACATGGGATTAAGTGGCACCATTGACATAGACATTCTTTCCGAATTGTCTATTTTGAATAGCTTTAGTGTGATTAACAACAACTTTGAGGGTCCAATGCCGGAGTTCAAGAAGCTTGAGAGGCTAAGAGGATTGTTTCTTTCCAATAACAAATTCTCCGGCCAGATTCGCGACGGTGCGTTCGACGGCATGAGGAGGCTGAAGAGGGTATTCTTGGCGGAAAACGAGTTCAGCGGCCATATTCCTAGCTCTCTTGCTCAATTGCCAAGGCTTTTGGACGTGGACTTGCATGGAAATAGATTTGATGGTACCATACCTGAATTTGAGAATAGCGATTTTAGGGTTTTTAATTTATCAAACAATCAATTGGAGGGTTCAATTCCAAAAAGCTTGAGCAATGTGGATCCAAGTGCATTTGCTGGTAACAAAGGACTATGTGGAAAACCTCTAAGCAACCCTTGCAGCAATAATGAACAACCCACCCCTCAAAATGACAACAAAACTAACAAACATCGCACACTAATAATTATAATTATCATAGTGGTAATTGTGGTTATCTTAGTTCTAATCCTAGCACTCTTCATAATCATAAATCGCAGAAGAAAAGCCAAAAACCCTAATCAGCTGGTAGAGGCTGCAAATGCATCAAAACATCAGAGTAGTGTTGCAGTTTCAAGTGATGAGGCCAAGATAGCGACATCCATGGAGGCAAGGGCATCCATTGAGCCAAACTTTAACTTTGTGAGGGAAGATAGAGAGGTTTTTGATCTGCAATACCTGCTGAGGGCCTCGGCCGAGGTCCTCGGCAGTGGAAGCTTTGGATCAACCTACAAAGCTATGATTCATAGTGGTCAAGTTGTGGTGGTGAAGAGGTTCAAGAACATGAACAAGCTTGGAAAACAAGAATTCTTTGAGCACATGAGAAGGCTTGGGAGGTTGACACACCCTAATGTGCTCCCTCTAGTTGCATTCTACTATGGAAAAGAAGAGAAGCTTTTGGTCTATGACTTTGTTCAAAATGGGAGTTTGGCTAGTCATCTTCATGGTAAACGAAGTTTAGCGTTAGATTGGCCAACTCGTTTGAAGATCATAAAAGGAGTAGCAAGAGGCTTAGCATACTTATACAAGGAATTTCCAGACCAAAAGCTGGCCCATGGACACCTCAAATCCTCAAATGTTTTGTTAGATCATGCATACAAGCCTCTTTTAACAGAATACCAACTCGTGCCAGCAATAAACAAAAGCCACGCCCAGCAATTCATGGCAGCGTTCAAGTCTCCCGAGGGAAGCCAGCACGACAGTCCTGGCGACAAGACTGACGTGTGGTGCCTCGGGATCCTTATACTGGAGTTGCTGACAGGAAGGTTTCCTGCAGATTACGTGAGGCACGGAAAGGGTGCGAGCGAGGAGCTAGAGACATGGGTGAAATCTATTGTGAGTGGGGAGGTGATTGATAAGGACATGGTTGGAGGAAGCAATGGTCAAGGGGAGATGTTGAAGATGTTGAGGGTTGGGATGGGGTGTTGTGAGTGGAATGAGGGGAGTAGGTTGGAATGGAAGGAAGCTGTAGCCATGATTGAGGAGGTGAAAGAGAAAGATAATATGGAAGATGAATCTTCTGGTTTTAGTGAGTGGGACTTGTCCTTTTATTCGGAAACTCTTTAG 1893 0.44 MAHERKHYCFIFFFFLLLSMVFATLSRADNDTQILLRFKNSLSDAGALQNWDESINICSWTGLLCKDDKLHGLKLENMGLSGTIDIDILSELSILNSFSVINNNFEGPMPEFKKLERLRGLFLSNNKFSGQIRDGAFDGMRRLKRVFLAENEFSGHIPSSLAQLPRLLDVDLHGNRFDGTIPEFENSDFRVFNLSNNQLEGSIPKSLSNVDPSAFAGNKGLCGKPLSNPCSNNEQPTPQNDNKTNKHRTLIIIIIIVVIVVILVLILALFIIINRRRKAKNPNQLVEAANASKHQSSVAVSSDEAKIATSMEARASIEPNFNFVREDREVFDLQYLLRASAEVLGSGSFGSTYKAMIHSGQVVVVKRFKNMNKLGKQEFFEHMRRLGRLTHPNVLPLVAFYYGKEEKLLVYDFVQNGSLASHLHGKRSLALDWPTRLKIIKGVARGLAYLYKEFPDQKLAHGHLKSSNVLLDHAYKPLLTEYQLVPAINKSHAQQFMAAFKSPEGSQHDSPGDKTDVWCLGILILELLTGRFPADYVRHGKGASEELETWVKSIVSGEVIDKDMVGGSNGQGEMLKMLRVGMGCCEWNEGSRLEWKEAVAMIEEVKEKDNMEDESSGFSEWDLSFYSETL 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02760 630 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 615 - -
Aip10g02760 630 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 10 615 - -
Aip10g02760 630 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Aip10g02760 630 ProSiteProfiles Protein kinase domain profile. 338 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02760 630 SUPERFAMILY Protein kinase-like (PK-like) 342 605 IPR011009 -
Aip10g02760 630 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Aip10g02760 630 SUPERFAMILY L domain-like 30 210 - -
Aip10g02760 630 Pfam Protein kinase domain 341 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02760 630 Gene3D Phosphorylase Kinase; domain 1 305 413 - -
Aip10g02760 630 Gene3D Ribonuclease Inhibitor 137 234 IPR032675 -
Aip10g02760 630 Gene3D Ribonuclease Inhibitor 29 136 IPR032675 -
Aip10g02760 630 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Aip10g02760 630 Gene3D Transferase(Phosphotransferase) domain 1 414 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02760 Aip-Chr10 118994897 119000880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02760 15 622 Receptor kinase-like Gene Family AT5G35390 46.772 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip10g02760 Pkinase 1.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02760 - - adu:107470884 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02760 10 118994897 119000880 Aip10g02760 10 118994897 119000880 ECH