Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02747 ATGGATCCACCAAAGAAATCTAACAAGATCAAGGACATTGTCAGGCTTCAACAGATCCTCAAGAAATGGAGAAGGATTGCCAACTCTTCAAAATCAAGTGACAACAACAACAACAACAATCATAGCGGCAGCACCAGCAGTAAAAGCATCAACTTTCTGAAAAGGACACTTTCTTTGTCCGAACGTGACAAAGGATCGTCGAGCAATGCAGTTCCAAAAGGCTACTTAGCTGTTTGCGTCGGACTAGAGCTCAAGAGATTTGTCATACCCACTGTATATTTGGGTCACCAAGCCTTTCACATGTTGCTAAGAGAAGCTGAAGAAGAGTTCGGGTTTGAGCAGACCGGCGTTCTGAGGATTCCTTGTGAAGTATCTGTGTTTGAGAGTGTCCTGAAGATGGTGGAGGAAAAGGACAAGTTTTCGGCTCACAATTGCGGATTATTCAGTGTAGAAAAGATGATGATGGGGTACTGCTCCTTCAATCAGCTTACTTATTCGCATCATCCTCAAAGTCCTATGTGCAGATAG 528 0.4356 MDPPKKSNKIKDIVRLQQILKKWRRIANSSKSSDNNNNNNHSGSTSSKSINFLKRTLSLSERDKGSSSNAVPKGYLAVCVGLELKRFVIPTVYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESVLKMVEEKDKFSAHNCGLFSVEKMMMGYCSFNQLTYSHHPQSPMCR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02747 175 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 175 IPR003676 GO:0009733
Aip10g02747 175 Pfam Auxin responsive protein 22 134 IPR003676 GO:0009733
Aip10g02747 175 PANTHER OSJNBA0060N03.10 PROTEIN 6 175 - -
Aip10g02747 175 MobiDBLite consensus disorder prediction 27 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02747 Aip-Chr10 118759454 118759981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02747 5 175 Calmodulin-binding Proteins AT2G24400 55.615 7.78e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02747 K14488 - aprc:113865930 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02747 10 118759454 118759981 Aip06g03228 06 128383403 128384198 PCT