Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02704 ATGTTTTCAGTTGCGCCTTTGACTCCGGCAAGTTCACCGGTAATGGCTCCGCCGTCTCCGCCGCTGATTGACATTACTCCTCCCCCATCGCCATTGCTGCTCCAACCTACAGCAGCGCCACCACCATTTCCTTCTCCGCCATCACCGCCGTTAGTGCTTCCAATGCCTACAGCACCACCGCTTACCTCGCCGCCGATCACTTCTCCGCCGGAGGTGGTGTCTATGCCTACAAACTCCCCGCCTCCGGTTACTCAAGTCCCGCCGGCGATTTCCTCGTCGCCGCCTCAGCCGGAAATTCCATTCGTCGCTGCTTCACCGTCGACTCCGATTACATCGAACGAGAATCCAATTCCAGCAACGCCATCTCCTCCGAATACGGCGTTGCCGACGGCAGCATCTCCTCCGGTTCCGGCGACACCGCTTCCTTCGTCTCCGCCAACTCTGATTCCGCCGTCGGTTACTTTTCCGTCAAATGCGTTACCACCATTGCCGCTGCGTCACCGGAAAGTTTCGCCGGCGCTTCCAGTTCCGACAGCCACTTCACCACCACCACAGGAATTTTGGCCTCTGGCACCGGAAGCAGCAGCAACCTCTCCGCTGCTGCCACAGCCGCCGGCGACCGTTTACCCTTTCACGGGGCCTACATTGCCATCAACTCCAGAATCAACGCCGGCGCAGCCACCATCGAGTCGAAGCTTGCCGCTTGCGGTGGACGTTGATAAACACTCAGGGTTCGAAGTGCCAAGTGGATTCATAATTGAGGGAATCGTAATTGGTGGTATCGTTATTGGGTTTGTTGTAGCACTTATGTTACTTTTGTGCAGGAATAGAAAGAAAAAGCAGCAGCAGAAGAAGAATCTGCATACACATCAATCTGAGGAATCATCACCTTGTGTTGGAGCTAAGAAATCAGGTTCTCATGTCATCAAAGTGCTGCCAAATCCATCAAAGCTAACAGAGGGAGGTGGAGATTTCGGCCCTGTGAATGGCATTTTCACATATGATGAGCTAGTAGCAGCCACTAAGAGTTTCTCTGAAGCCAACCTTCTTGGGGAAGGTGGATTTGGTTATGTATATAAAGGAATTCTTCCAAGTGGAAAGGAAATTGCAGTTAAACAGTTGAAATCAGGAAGCCAGCAAGGAGAGCGAGAATTTCAGGCCGAGGTTGAGACCATTAGCCGGGTGCATCACAAGCATCTTGTTGAGTTGGTTGGATACTGCGTTACCATGTCTGAAAGAATGCTTGTTTATGAATTTGTTCCAAATAACACATTGGAATTCCATTTACATGGGGAAGGGAAGCCCGTTGTACGGTGGGAGAAGAGAATTAAGATTGCCCTAGGATCTGCAAAAGGGCTCGCATATCTACATGAAGATTGTAATCCAGCAATCATTCACCGTGATATTAAAGCATCTAACATCCTTCTGGACTTCAATTTTGAAGCAAAGGTTTCTGACTTTGGCTTAGCAAAGATCTTCCCCAATGCTGATGGTTGCATCACTCACCTCACCACCCGGGTCGTGGGAACCTTTGGGTATCTGGCTCCAGAATATGCATCAAGTGGTAAACTAACAGATAAATCAGATGTATATTCCTATGGAGTGATGCTTTTAGAACTCTTAACTGGACGTCCAGCAATCAGTACAGAAGGATCAAGAAACGTGAGCTTGGTTGATTGGGCTAGGCCCTTGCTTGCGCAAGTGCTAGAAGATGGTGATGTCAGTGATCTTGTTGATCCAAGGTTGCAGAATAATTATAGAGCTGATGAGATGACTAGAATGATTACCTGCGCAGCCGCCTGCGTGCGCCATTCAGCCAGCCTTCGACCCCGTATGAGCCAAATTGCAGGTGCCTTAGAAGGATTGGTTTCTCTGTCGGATCTTGTAGGGGACATTACGCCGGGGCATACCAGAATATACAGTTGGCCAGAGAGTTCAACTTATGATGCCTGCCAATACCAACAGGACTTGAGAGACTTCAATTTGGGATTATCATCTCAACAGTGCAGCTCAAGTGTGCATAGTGAAATGACTAGTGCTTATGGTCTTTGCCTATCTGACTCAAGTAGTGAAGGCTAA 2079 0.494 MFSVAPLTPASSPVMAPPSPPLIDITPPPSPLLLQPTAAPPPFPSPPSPPLVLPMPTAPPLTSPPITSPPEVVSMPTNSPPPVTQVPPAISSSPPQPEIPFVAASPSTPITSNENPIPATPSPPNTALPTAASPPVPATPLPSSPPTLIPPSVTFPSNALPPLPLRHRKVSPALPVPTATSPPPQEFWPLAPEAAATSPLLPQPPATVYPFTGPTLPSTPESTPAQPPSSRSLPLAVDVDKHSGFEVPSGFIIEGIVIGGIVIGFVVALMLLLCRNRKKKQQQKKNLHTHQSEESSPCVGAKKSGSHVIKVLPNPSKLTEGGGDFGPVNGIFTYDELVAATKSFSEANLLGEGGFGYVYKGILPSGKEIAVKQLKSGSQQGEREFQAEVETISRVHHKHLVELVGYCVTMSERMLVYEFVPNNTLEFHLHGEGKPVVRWEKRIKIALGSAKGLAYLHEDCNPAIIHRDIKASNILLDFNFEAKVSDFGLAKIFPNADGCITHLTTRVVGTFGYLAPEYASSGKLTDKSDVYSYGVMLLELLTGRPAISTEGSRNVSLVDWARPLLAQVLEDGDVSDLVDPRLQNNYRADEMTRMITCAAACVRHSASLRPRMSQIAGALEGLVSLSDLVGDITPGHTRIYSWPESSTYDACQYQQDLRDFNLGLSSQQCSSSVHSEMTSAYGLCLSDSSSEG 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02704 692 ProSiteProfiles Protein kinase domain profile. 344 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02704 692 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 124 665 - -
Aip10g02704 692 Gene3D Transferase(Phosphotransferase) domain 1 420 628 - -
Aip10g02704 692 SUPERFAMILY Protein kinase-like (PK-like) 330 619 IPR011009 -
Aip10g02704 692 MobiDBLite consensus disorder prediction 212 233 - -
Aip10g02704 692 MobiDBLite consensus disorder prediction 1 145 - -
Aip10g02704 692 MobiDBLite consensus disorder prediction 11 102 - -
Aip10g02704 692 MobiDBLite consensus disorder prediction 116 145 - -
Aip10g02704 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Aip10g02704 692 Gene3D Phosphorylase Kinase; domain 1 325 419 - -
Aip10g02704 692 Pfam Protein kinase domain 345 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02704 692 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Aip10g02704 692 SMART serkin_6 344 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02704 692 MobiDBLite consensus disorder prediction 212 230 - -
Aip10g02704 692 CDD STKc_IRAK 350 622 - -
Aip10g02704 692 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK14 124 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02704 Aip-Chr10 117426974 117432016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02704 204 691 Trihelix Transcription Factor Family AT4G32710 50.000 4.06e-141 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Aip10g02704 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02704 - - adu:107470979 1166.76