Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02697 ATGACTTCGCCATTTACTTTCTTTTGGGAAGCGTCATCTCCCCCATTGTTACAAGAAGAGGAGGCAGATTTGCAACACTATCTAACCCTCATGAGAGATCAAATAACAGATTACTTCATTCTCAAGGTACAAGTTACGCATCAAACTTGCTGGACTCATCATCAACAACCACAATCACAATCACATGCACCAGTGTTAGGAGCCATTTATTCGTTTACATCCTCAATTCTAATCCAAGCGCAAGAATTCCTTCAAAACGGTTCATCACACATGCAAATGCACTTCCCTGATGCTGTTATACCAATTGCCTTGATTCATAACATGATGCCAGATATTATATCCTACGCGAAAGCCATAATTCAAACTCGTCCTTCCGGATTCCTCTATGAAAGACCTGATTTTCGTTTGTTCAGTTTGTATCTGGACATTATTATCCAGAATCCTATATTGTACGTTGATGACTTGAATATCCAGAATTTGTCATTGGAAGTTGATGACTACGGCAACATGATCACCGACTTAATCATTGAAGAGTCCATGGAAGATCCTAATAATATTAAGATGGTTCCTGCATCGAAGAATGCCATTGAGTCTCTTGAGAAAGTGAAGCTTGAAAATAATAACCACCTAGCAGAGAGGTGCAGTATTTGTCTGACTGAATTTGATTATGGTGATGATGCAGAACAAGTTTCATCAATGCCTTGTAAGCATGTATATCATCAAGAGTGCCTCATCCAGTGGCTCAAGACTAGTCATTTGTGTCCTTTATGTCGCTATCCGATGCCAACTAATTAG 795 0.3937 MTSPFTFFWEASSPPLLQEEEADLQHYLTLMRDQITDYFILKVQVTHQTCWTHHQQPQSQSHAPVLGAIYSFTSSILIQAQEFLQNGSSHMQMHFPDAVIPIALIHNMMPDIISYAKAIIQTRPSGFLYERPDFRLFSLYLDIIIQNPILYVDDLNIQNLSLEVDDYGNMITDLIIEESMEDPNNIKMVPASKNAIESLEKVKLENNNHLAERCSICLTEFDYGDDAEQVSSMPCKHVYHQECLIQWLKTSHLCPLCRYPMPTN 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02697 264 Pfam Ring finger domain 213 258 IPR001841 -
Aip10g02697 264 PANTHER F6A14.12 PROTEIN-RELATED 83 263 - -
Aip10g02697 264 SMART ringv_2 213 258 IPR011016 GO:0008270
Aip10g02697 264 SMART ring_2 214 257 IPR001841 -
Aip10g02697 264 ProSiteProfiles Zinc finger RING-type profile. 214 258 IPR001841 -
Aip10g02697 264 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 83 263 - -
Aip10g02697 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 177 263 IPR013083 -
Aip10g02697 264 SUPERFAMILY RING/U-box 196 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02697 Aip-Chr10 117188526 117189320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02697 176 262 C3H Transcription Factor Family AT1G18760 39.080 2.68e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02697 - - adu:110276959 479.944