Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02688 ATGGAGCAGAGCGAAACGGCTTTGGATCTAGCTCCGAAATTGGTGAGGCAGTTGGATTTCACAGCACACCTGAAACTGGCGCCGACTCCGCCGCCGCAGTCGCTGGCAGAGGCGATTCCGCGAACGCCATCACGATCACCGTTGCAATTGCAATTGACTCTGCATCCGCTAGGGCAACAGCAACAACAGCAGCAACAACCGCAGCCGTGGTTGTTTTCGCAGGGACAGCAGCTGAGAGTGCCGCCGCAGTCGCCAGCGGTGCGGCAGCAAAAGCTTTCGCCGGTTCCTCGAATTCCGTACACTGTCCAGAAGCTTCCGGTAAAGGCGTTCAAAGTGTCGAAGCAGGAGTCTCCCAGTCCCAGATCACAACCTTGGTATAATGTTGAATTAAAAGACAGCACTCCAAAGAAATCAAAACAATGTAACTGCAAAAATTCTCGATGCCTCAAATTGTACTGTGAATGCTTTGCATCTGGGATGTATTGTGATGGTTGCAATTGTACAAATTGTCAAAACAATGTGGATAATGAGGCAGCTAGACAGGAGGCTGTTGGACTTACATTAGAGCGCAATCCAAATGCTTTGAGACCAAAAATTGCTAGCAGTCCACAAGAAACTCGAGATTCCAAGGAAGATGTGTCTGAAATTCAATTAGTTGGAAAGCACAATAAAGGATGTCACTGTAAAAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAAAATTGCAAATGCATGGACTGCAAGAATTTTGAAGGAAGTAATGAAAGAAGAGCAAGTTTTCATGAAGAGTGTAATATGTTTCGCATCAAACAGGAAGCAAATGCTGCCATCAGTGGAGCAGTTGGTTTCTCTGGCTACGGGACTGGAATTGCCATAACACCCAAGAAAAGAAAAATTCAGGAAATATTTTCTAGCAAATCGTCAATAGATAAAACTGTTTGCCAAACAACTCAATATCAACAGGAAACTGATCCTATAGTTACACCACCGACATCTCAGTCAACTTTCTTTTATGTTGACACTGCCAACACTAGAAATTCAGGTTATTCAAGATCTACATACAGGTCACCATTGGCGGATGTCCTCCAGCCACAAAATGTGAAGAATCTCTGTTCACTTTTTGTTGTTCTCTCAGGAGTAGCTGCCAAGACAAATGCAGAAATGAGAGCCAAAGTAGGCCAGAACGTTGATGCTGGGAAATTTAAATCTTCTATTCCTTCATCAACTCAGTTGCTGCAAGACAGGGAAGATGTCTGCAAGTTTGTATGTGATAATTGTAAAGATGAAGTAGATAGAGTTGATATTGACTGTTATAATAGGCCACTTTCACCAGAAACCCTATCACTGATGTGTGATGAACAAGATGAGGTGTTTTTCGATAATGGTTCTGCAAATAGAGTGGCATGCAACAATTTTCAAAGCATTGTTCAAAATTCATCTACTTCTGATCGATGCCCTGATGTGTATGAGGAGCAAGAAAGGGTTGTACTCACAAAGTTCTGGGATGTTCTACGCGGACTCATTACTGTTGGAAGCATAAAAGAAACAATGTGCTCTTCATTAGCCAAGAAAGACGGGGGAAGCGAGGAAGAACTTGCAGCCAACAGTAATGGTGCTGAAGTTGATATAGGGAGTGAAAAGAAGGAAACTCCCAGCAACTGTGTTGCAAGGTGCCCCATCTCATCATCGGCCATTGAAATATCTCAGAAAAAGCATGCAATGATCGATGGCAATGGTGATCTTGATCTCTCGTTAAGGTTTGCTTGCCAATTTTATGGAAGGGAATGA 1815 0.4342 MEQSETALDLAPKLVRQLDFTAHLKLAPTPPPQSLAEAIPRTPSRSPLQLQLTLHPLGQQQQQQQQPQPWLFSQGQQLRVPPQSPAVRQQKLSPVPRIPYTVQKLPVKAFKVSKQESPSPRSQPWYNVELKDSTPKKSKQCNCKNSRCLKLYCECFASGMYCDGCNCTNCQNNVDNEAARQEAVGLTLERNPNALRPKIASSPQETRDSKEDVSEIQLVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSNERRASFHEECNMFRIKQEANAAISGAVGFSGYGTGIAITPKKRKIQEIFSSKSSIDKTVCQTTQYQQETDPIVTPPTSQSTFFYVDTANTRNSGYSRSTYRSPLADVLQPQNVKNLCSLFVVLSGVAAKTNAEMRAKVGQNVDAGKFKSSIPSSTQLLQDREDVCKFVCDNCKDEVDRVDIDCYNRPLSPETLSLMCDEQDEVFFDNGSANRVACNNFQSIVQNSSTSDRCPDVYEEQERVVLTKFWDVLRGLITVGSIKETMCSSLAKKDGGSEEELAANSNGAEVDIGSEKKETPSNCVARCPISSSAIEISQKKHAMIDGNGDLDLSLRFACQFYGRE 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02688 604 PANTHER TESMIN/TSO1-RELATED 1 572 IPR028307 -
Aip10g02688 604 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 139 173 IPR005172 -
Aip10g02688 604 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 224 258 IPR005172 -
Aip10g02688 604 ProSiteProfiles CRC domain profile. 137 261 IPR005172 -
Aip10g02688 604 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 572 - -
Aip10g02688 604 MobiDBLite consensus disorder prediction 25 44 - -
Aip10g02688 604 SMART CXC_2 221 262 IPR033467 -
Aip10g02688 604 SMART CXC_2 136 176 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02688 Aip-Chr10 116904228 116908979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02688 116 532 CPP Transcription Factor Family AT4G29000 50.688 5.66e-127 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aip10g02688 TCR 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02688 - K21776 gmx:100811459 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02688 10 116904228 116908979 Aip10g02688 10 116904228 116908979 ECH