Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02683 ATGATGAGGATAGAGTTGACCAGAGAAAGTGGTTATTGGTTTTTACCCACAACTTTTGCGCTGTCAAAGAAGACAAAATTGGATCCCGACCGTCTGCCGTCTTGTATCACATATGTTTATTTGGACAAAGTTGACTGCTTAAAAAGAGTGTTTATCCCTGTATTTGAAACTACTGACGAAGGTCATGAACACTGGTACCTCGTAGTGATTGATCGTGTTAAAAGACAAATCATTTTGCTAGACCCATTTTCCATTGAGAAACAGTTCAAGCCAAAGAGGACAGCCTTGAAATTAGTCTCTGTCTCGCACCTGGCCTCGATCTCTCCCTTCCCTGCGCTCTTCGTCGCCGGTAGCAGAGGCAACATATTCCGGTGGGCTTATCTTCGTTGTCGTCTTCTTGCTTCGAACCTTGCCGTCAGCTTCTCCCTCGCCATCAGCTTCTCCTTCGCCGTCAACTTCCTTCTTGCAACCCGATTTGttttGCTTCATCtctctgcccagGTAACCTCGTGTAAGCTATGGCGGCAAGTGGGAGAATCTTTCAAACCTCCTAAGACATGTACCACAGTTTCATGGACTTTCCGTGGGTTTTATGAGAAGGCACTTCTTGATTATGAAAGACATAAGATAAAAGGTGGTGAGCTGAGTGTTCCAATTCCTTCACAACCAGAGCCTATGAATATCGAAAATCGGACTTCAGCATCAGGTAGAGCACGTAGAGATGCTGCAGCACGCGCTATGCGGGGTTGGCACTCACAACGTCTTCTAGGCAATGGTGAAGTTGGTGACCCCATTATTAAGAAGGATTGCTTTGAGGTATATGCTTTAGTTCCTAGTCTACTTCGAGAAGAGGGAAGGACAAGATTAGGGGAGTCTAAAATGGCAGTTAACGATGCAATGAATGTTGGCTCGTCAACTGTATCAGATCCCCACAAAGCTGAAGTGATGCCAGATGTATTGCCTGAAATTAAGATATATGCTGATGAAAATGTGAGAGATTGCGTTTTTACATCTGAACTGGGGACTAGTTTGAAGGGAAAGGATGAGATCAAAACAGATGTTGAAGAAGTTGAAATTATAGTCCCTTCGGATACTGGTGTTGGTGAAAATGAAGATGACTCTGCAAGATCAGTTAGAGATGCAGTTAACTTGGATCCTCAAGTGGCTGGTGGAGTTGTTAATCTGAAGGAAAAAGACAGTGCCGAGTTCCCTTCTGTGCTTGGCCAAGATGATTCCCCACTTGGTTCAAATTCTGTTGTAATAACAAATGCTTCAATACGTGATGTACAGTTAGAGTCTGCTCATGTTCAGTTTTCTAATTCTAGTGATGCTCAGACTTTACTTGAAAAGGAAGAAGAAAATACTAATTCTAATATCCTTCCTACAAGTGTTGATAGAACTGAAGAATCGCCTTCAGCTCAAGCTCTGATAAACGACGCTGCAAAAGAATGGAACTCACCGGCAAGATATCCTACGGAAATGAAGAGGGAAAAATGGAAAGCCAAGAGCAGACCATATTGGATACAATTAGTATGTTCCTCATCAGTGGATCTTCAGAGAAGGCAAAAAACTGTCATATGA 1581 0.4257 MMRIELTRESGYWFLPTTFALSKKTKLDPDRLPSCITYVYLDKVDCLKRVFIPVFETTDEGHEHWYLVVIDRVKRQIILLDPFSIEKQFKPKRTALKLVSVSHLASISPFPALFVAGSRGNIFRWAYLRCRLLASNLAVSFSLAISFSFAVNFLLATRFVLLHLSAQVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIKGGELSVPIPSQPEPMNIENRTSASGRARRDAAARAMRGWHSQRLLGNGEVGDPIIKKDCFEVYALVPSLLREEGRTRLGESKMAVNDAMNVGSSTVSDPHKAEVMPDVLPEIKIYADENVRDCVFTSELGTSLKGKDEIKTDVEEVEIIVPSDTGVGENEDDSARSVRDAVNLDPQVAGGVVNLKEKDSAEFPSVLGQDDSPLGSNSVVITNASIRDVQLESAHVQFSNSSDAQTLLEKEEENTNSNILPTSVDRTEESPSAQALINDAAKEWNSPARYPTEMKREKWKAKSRPYWIQLVCSSSVDLQRRQKTVI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02683 526 SMART bright_3 124 211 IPR001606 GO:0003677
Aip10g02683 526 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 167 267 IPR045147 GO:0006357
Aip10g02683 526 SUPERFAMILY Cysteine proteinases 11 97 IPR038765 -
Aip10g02683 526 Gene3D - 163 216 IPR036431 GO:0003677
Aip10g02683 526 SUPERFAMILY ARID-like 166 217 IPR036431 GO:0003677
Aip10g02683 526 CDD ARID 166 206 - -
Aip10g02683 526 Gene3D Adenoviral Proteinase; Chain A 2 109 - -
Aip10g02683 526 MobiDBLite consensus disorder prediction 450 469 - -
Aip10g02683 526 PANTHER BNAC07G06470D PROTEIN 167 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02683 Aip-Chr10 116876483 116882056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02683 168 334 ARID Transcription Factor Family AT1G76510 47.429 7.75e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02683 - - aip:107622719 458.759