Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02663 ATGCTTCTAGACAAGAATGTCATTTATGAAACGCATTATGAGGTTCTCAACGTCAAGGAAGATTCAAGTTATGAAGAAATCTGTGCTAGTTACTGCTCCGCCATACTCAGCTTACATCCTGATAAGCTATTGAAATCTTCTGATGCATCCGGCAGCAATCAAACTAGTGGAGATAGATTTCTCAAAGTACAAAAGGCGTGGGAAGTTCTTGGCGATTCAAGCTCTTGTTTATTTTATGATAATGAGCTTCGAAGTTCAAGGCGTGATGTCTAG 273 0.3956 MLLDKNVIYETHYEVLNVKEDSSYEEICASYCSAILSLHPDKLLKSSDASGSNQTSGDRFLKVQKAWEVLGDSSSCLFYDNELRSSRRDV 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02663 90 CDD DnaJ 11 72 IPR001623 -
Aip10g02663 90 Pfam DnaJ domain 11 80 IPR001623 -
Aip10g02663 90 SMART dnaj_3 10 75 IPR001623 -
Aip10g02663 90 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Aip10g02663 90 PRINTS DnaJ domain signature 55 75 IPR001623 -
Aip10g02663 90 PRINTS DnaJ domain signature 31 46 IPR001623 -
Aip10g02663 90 PRINTS DnaJ domain signature 13 31 IPR001623 -
Aip10g02663 90 SUPERFAMILY Chaperone J-domain 10 83 IPR036869 -
Aip10g02663 90 PANTHER DPH3 HOMOLOG-RELATED 1 89 IPR044248 GO:0017183|GO:0046872
Aip10g02663 90 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4 1 89 - -
Aip10g02663 90 Gene3D DnaJ domain 2 88 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02663 Aip-Chr10 116723681 116723953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02663 12 80 C2H2 Transcription Factor Family AT1G74250 40.580 9.55e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02663 K17867 - gmx:100814856 137.117