Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02649 ATGACAGAGGTGTTTGACAAGTTGATGGATGTCAATGCACGAAAACTTGATTGGAACTTTCAAGTTTATGCTTTCCACCTCTGGGAAGTTCCTAATAGATTTAATATAAATGATATCAATGGAATAGAGATGGTTCTCCAAGACATTCAGCCTGTTGCTAAACCAAGTTATCCTCTGAAAGCATTTTGCTTTAAACCCATTCCGGAGTTGCTGGCTGCCGAAAAGCTGGAAGATTCAGTGCTTATAGATGTTATAGGGGAAGTGGTTGGTAAAGAGGATCCAAGACAACTGATAACTAGCAAAGGAAGAGAAACAAAAAGATTGGCTGTGATACTTGAAAACAATAGTATTAGCTGTGTGTTGTTTGGACATATGGTCGACCAAATACTCCCATATCTAGAAGAAGGAAGGGTGGAGCCACTAATAGTTATAGCACAGTTTTTTAAACCCAGCAGGTGGAATGAAAAAATATCAGTGCAAAGTCATTTTGATATATCCAAGTTACGTATTAACCCTGAACTTGATGAGGTCAAAGAGTTTCGTAACAGGAGGCTTTCTAGCAAACCATCTAATTCGGCAAGGATTAGTCAAGTTTCATCCCATGGTCCACGTTCCGGTGCAGACGAAATAAGAAATGGGGATGCCGTAGTCAAAACAATTGAAGAAGTTTTAAGCTCTACACAGGAAGGACTTACATGGATTGCCGGTACTATTGTTTTGATCAATGCTGGAAAGGATGATTGGTTTTATAAATCCTGCCGAAAGTGTCCAAAGAAGGTAGACACCCCAATCGGCAACAGATATGAGTGTGAAAAATGTGGCCACACTCATGGTAGCGCATCACTTAGGTTCAAGCTCGAGGTAATGGTATATGATGGAACAGGAAGCTTGATGTTGCTGATGTGGGACAGGAAAACGGTACAGCTTTGTGGGAGGCAAGCTGAGCAAATCAAGAATGAAGAAGCCGTTGATGGAGAAGGTTATCCTCCAGCATTGGATAGCATGATGGATAGGAGGTTACTCTTCAAATTAAATGTCAAAGTGTCGAACATTAAGCAGTATGACCATGTTTATACAGTCATGAAAATATGTGATGATGAGGAAATTGTGGAGATTAACCACCCTAAAGCAGTTCCAAACATTGCTGCTGCTACTCTCACTGATACTGGATGCAGTGACTCACTTGATATATCGGCAGCGGTGGTTAATCTGCATAATGATACTGATTCTACACTTTCTGTGGATGGCTTAGAAGATAGTGTCACAAGCCTCAAGTCCAAAACCCCTGCTAAAAGAGCTTCCGTGGGGCTAAAGCAATCCGTGCATATCAATATTGACAATGAAGATGAGTTGGGGTTCTCTACCAACAAGTTTAGCCGAAAGGGTGGAAAGAGGCAGAAGATGCAAATTAATGACAGTGACAACTGA 1428 0.4111 MTEVFDKLMDVNARKLDWNFQVYAFHLWEVPNRFNINDINGIEMVLQDIQPVAKPSYPLKAFCFKPIPELLAAEKLEDSVLIDVIGEVVGKEDPRQLITSKGRETKRLAVILENNSISCVLFGHMVDQILPYLEEGRVEPLIVIAQFFKPSRWNEKISVQSHFDISKLRINPELDEVKEFRNRRLSSKPSNSARISQVSSHGPRSGADEIRNGDAVVKTIEEVLSSTQEGLTWIAGTIVLINAGKDDWFYKSCRKCPKKVDTPIGNRYECEKCGHTHGSASLRFKLEVMVYDGTGSLMLLMWDRKTVQLCGRQAEQIKNEEAVDGEGYPPALDSMMDRRLLFKLNVKVSNIKQYDHVYTVMKICDDEEIVEINHPKAVPNIAAATLTDTGCSDSLDISAAVVNLHNDTDSTLSVDGLEDSVTSLKSKTPAKRASVGLKQSVHINIDNEDELGFSTNKFSRKGGKRQKMQINDSDN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02649 475 SUPERFAMILY Nucleic acid-binding proteins 64 183 IPR012340 -
Aip10g02649 475 MobiDBLite consensus disorder prediction 454 475 - -
Aip10g02649 475 CDD RPA1_DBD_B_like 83 184 - -
Aip10g02649 475 PANTHER REPLICATION FACTOR A 1, RFA1 62 372 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aip10g02649 475 SUPERFAMILY Nucleic acid-binding proteins 218 370 IPR012340 -
Aip10g02649 475 MobiDBLite consensus disorder prediction 181 209 - -
Aip10g02649 475 Gene3D - 57 192 IPR012340 -
Aip10g02649 475 Pfam Replication factor-A C terminal domain 236 363 IPR013955 -
Aip10g02649 475 CDD RPA1_DBD_C 217 375 IPR013955 -
Aip10g02649 475 Gene3D - 201 372 IPR012340 -
Aip10g02649 475 MobiDBLite consensus disorder prediction 186 203 - -
Aip10g02649 475 PANTHER BNAC07G49340D PROTEIN 62 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02649 Aip-Chr10 116410866 116413432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02649 56 317 Core DNA Replication Machinery Family AT2G06510 25.818 1.68e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02649 - - aip:107630584 593.964