Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02618 ATGAGGGTTTGCGTCGCGATTCATCTTCGCACTGCTGCAAATTACTCGCAACTCTCTCCCAATGTCGATCCTCACGCGCCTTCACGCGCTGCTCTCAGAGTTCAAAAGGTTTACCGCAGCTACCGTACTCGCCGCCGCTTGGCCGATTCCGCTGTCGTCGCCGAAGAGCTCTGCGCTGCTTCTCGCTGGAGCCGTGTTCGTCTCAATGCTTCCAAGGTGGGTAAAGGTTTGTCCTTAGATGCCCAAGCTCAAAAGTTGGCTTTTCAGCACTGGATTGAAGCTATTGATCCACGCCATCGTTATGGACACAACTTGCATTACTATTATGAAGAATGGTGTAAAACGGATTCTAGAGATAACCTTACAGGGCTGTTTCCTGGATCATCATTGGATATTGGAAGCCTCCACTTGGACTCCAAACAATTGTCTCAAATAACATTGAACCTGCCTGCTAATGCATTTGCTTCCAAAATTATCCTGTGGATAATAGTACTTAGCCCCTTCACCAAATATCCTTATTTTTAG 525 0.4724 MRVCVAIHLRTAANYSQLSPNVDPHAPSRAALRVQKVYRSYRTRRRLADSAVVAEELCAASRWSRVRLNASKVGKGLSLDAQAQKLAFQHWIEAIDPRHRYGHNLHYYYEEWCKTDSRDNLTGLFPGSSLDIGSLHLDSKQLSQITLNLPANAFASKIILWIIVLSPFTKYPYF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02618 174 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 23 57 IPR044159 -
Aip10g02618 174 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3-LIKE 59 118 - -
Aip10g02618 174 ProSiteProfiles IQ motif profile. 28 56 IPR000048 GO:0005515
Aip10g02618 174 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3-LIKE 23 57 - -
Aip10g02618 174 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 59 118 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02618 Aip-Chr10 115386951 115389014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02618 124 171 Amino Acid or Auxin Permease AAAP Family AT2G41190 47.917 5.42e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02618 - - gmx:100806520 166.777