Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02616 ATGGTGCTCACAGACATCATGTTGGTTAGGTGCGCATGTCCCGCAGTCAGTCGTGCTGCTCGTCCTCCGCCGTGCTTGTCAGTCGAAGGGATCAGGAGATATGGTTATGAATATGTACATGGATTGTTGCTGCCAAGGTTATGCCTTATTTGTGGAGTAAGATATAGTCTCTTTGGGATAGTTGTGGTTGATTTTTTGACTGTATCAACGACCTCGAGTGATGATAAATGGGACGACGACGAAGGCCTCAAGTGCCATGAGGGCCGTGAATCCGGGGAAAATAGTGTACGGGGTGCCGTCGATGGTAACAGGTCGGCTGGTGCAGATGATACGGCAGAGGGTGGTCTCAGTCGTCCAGTCGGTGCGCAAGACTTCTTGGGAAAAGAGTTTGCAACGAAGGAGGATGCTTATGCTACCTATAAGGAGTTCGCTAAATTAAGGGGTTTTGGAGTTCGAAAAGGAGATGTAGCTCGTGTGAATGGGGTGTTGATTAGGAGAGACTTTTTCTGCCATCGACAAGGTACAAGACATCCTAAGCACTATGACCGTCCTGAGCGAGTAAGGGAGGAGAGGTTGGAGAATCGCACGAACTGTAAGCCAAAGTTGAAGATTTACTATGATATGCAACATAGCGTATTGGAGAGGGTTTTTTGA 654 0.4801 MVLTDIMLVRCACPAVSRAARPPPCLSVEGIRRYGYEYVHGLLLPRLCLICGVRYSLFGIVVVDFLTVSTTSSDDKWDDDEGLKCHEGRESGENSVRGAVDGNRSAGADDTAEGGLSRPVGAQDFLGKEFATKEDAYATYKEFAKLRGFGVRKGDVARVNGVLIRRDFFCHRQGTRHPKHYDRPERVREERLENRTNCKPKLKIYYDMQHSVLERVF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02616 217 Pfam FAR1 DNA-binding domain 140 206 IPR004330 -
Aip10g02616 217 MobiDBLite consensus disorder prediction 73 94 - -
Aip10g02616 217 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 94 208 IPR031052 GO:0006355
Aip10g02616 217 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 94 208 - -
Aip10g02616 217 MobiDBLite consensus disorder prediction 71 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02616 Aip-Chr10 115355228 115357464 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02616 FAR1 6.2e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02616 - - aip:107620850 270.781