Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02612 ATGCTTCATAGCCAGGTAGCGGTGGTGCTCACAGACATCATGTTGGTCAGGTGCGCATGTCCCACAGTCAATCGTGCTGCTCGTCCTCCGCCGTGCTTGTCAGTCGAAGTGAGTGTGAAGACCTCGAGTGATGATAAATGGGACGATGACGAAGGCCTCAAGTGCCATGAGGGCCATGAATCCGGGGAAAATAGTGTAGGGGGTGCCGTCGATGGTAACAGGTCGGCTGGTACAGATGACGTGGCAGAGGGTGGTCTCAGTCGTCCAGTCGGTGCGCAAGACTTCTTGGGAAAAGAGTTTGCAACGAAGGAGGATGCTTATGTTGCCTACAAGGAGTTCGCTAAATTAAGGGGTTTTGGAGTTCGAAAAGGAGATGTAGCTCGTGTGAATGGGGTGTTGATTAGGAGAGACTTTTTCTGCCATCGACAAGGTACAAGACATCCTAAGCACTATGACCGTCCTGAGCGAGTAAGGGAGGAGAGGTTGGAGAGTCGCACGAACTGTAAGGCAAAGTTGAAGATTTACTATGATATGTAA 537 0.5065 MLHSQVAVVLTDIMLVRCACPTVNRAARPPPCLSVEVSVKTSSDDKWDDDEGLKCHEGHESGENSVGGAVDGNRSAGTDDVAEGGLSRPVGAQDFLGKEFATKEDAYVAYKEFAKLRGFGVRKGDVARVNGVLIRRDFFCHRQGTRHPKHYDRPERVREERLESRTNCKAKLKIYYDM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02612 178 Pfam FAR1 DNA-binding domain 110 174 IPR004330 -
Aip10g02612 178 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 82 175 IPR031052 GO:0006355
Aip10g02612 178 MobiDBLite consensus disorder prediction 43 61 - -
Aip10g02612 178 MobiDBLite consensus disorder prediction 43 84 - -
Aip10g02612 178 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 82 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02612 Aip-Chr10 115310117 115312347 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02612 FAR1 3.5e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02612 - - aip:107620850 298.516