Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02606 ATGGCCGCACCGGTCGAAATGGTGGTCGGAGACAAAGCTACTAGTGCTTCCAAGAGCCACAGTCAGGCCGAGAAGCGGCGCAGTGACCGGATCAATGCACAGCTTACAAGTCTAAGGAAACTAATTCCAAAATCTGATAAGAAAACCCAAAATCAAGGTTCTGAAAAGCCCGCCAAAGGAGAGTGCAGAGCGCGCCAAATTCTTCCATTCTCTACCGTGCCTCAATCTGTGACTGTGGAGACTCGTGGCTGTCGATCCATCATTCTCCCTCCTGCCGTCGACCCTTTCCAAAATCAGATTCGTAGCTCAGATTTTTCATCGCGCAAACACATAAGAGGCAGAGGCACGAAACACATCTCCCCGCGCCCATCCTTGCCGCCGTTCTCCTCCGGACACCACTAA 402 0.5199 MAAPVEMVVGDKATSASKSHSQAEKRRSDRINAQLTSLRKLIPKSDKKTQNQGSEKPAKGECRARQILPFSTVPQSVTVETRGCRSIILPPAVDPFQNQIRSSDFSSRKHIRGRGTKHISPRPSLPPFSSGHH 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02606 133 MobiDBLite consensus disorder prediction 18 33 - -
Aip10g02606 133 MobiDBLite consensus disorder prediction 1 74 - -
Aip10g02606 133 MobiDBLite consensus disorder prediction 95 133 - -
Aip10g02606 133 MobiDBLite consensus disorder prediction 41 62 - -
Aip10g02606 133 Pfam Helix-loop-helix DNA-binding domain 18 49 IPR011598 GO:0046983
Aip10g02606 133 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 15 70 IPR011598 GO:0046983
Aip10g02606 133 PANTHER TRANSCRIPTION FACTOR BHLH30 11 47 IPR045847 GO:0003700|GO:0006355
Aip10g02606 133 PANTHER TRANSCRIPTION FACTOR BHLH51 11 47 - -
Aip10g02606 133 Gene3D - 10 62 IPR036638 GO:0046983
Aip10g02606 133 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 49 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02606 Aip-Chr10 115010397 115016173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02606 4 47 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 60.870 5.29e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip10g02606 HLH 1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02606 - - adu:107469423 81.6481