Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02599 ATGGTTGATTTGATTGGAGAGTCATTGCATATCCAAATAGGGAATGTTTTAGCTGAGGAAATGGACGAATTGTTAGTTGATAGTGATGACAATGATGTTGAAGACCTGTTATTGAATAGTATAGGAAGTATCGGTCGGGTTAATTTCGTAGGTTTGAGCGTTGATGCTACTAAGAAGTATGTATTTTCAAACCTTGATGTTGCCTATGCCTTTTACAATGCATTTGGGAGGGTCAATGGATTTTCAATTAGGAAGTTCAAGGCTGGGCACAGTGAGATTGATAAGAGCATACTCTGGCAAACATTTGTGTGTTCGAGACAAGGATATCGTATTTTCAGAGGGGTCGATGAAACAAATAGGAAGAGAGCTCTAAAGCCAAAGACTAGGTGTGGGTGTGTAGCATAA 405 0.3926 MVDLIGESLHIQIGNVLAEEMDELLVDSDDNDVEDLLLNSIGSIGRVNFVGLSVDATKKYVFSNLDVAYAFYNAFGRVNGFSIRKFKAGHSEIDKSILWQTFVCSRQGYRIFRGVDETNRKRALKPKTRCGCVA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02599 134 Pfam FAR1 DNA-binding domain 71 134 IPR004330 -
Aip10g02599 134 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 47 134 - -
Aip10g02599 134 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 47 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02599 Aip-Chr10 114900722 114901233 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02599 FAR1 7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02599 - - aip:107623722 242.662