Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02577 ATGTGTGAAGATGGAGTTGGTGATACGGCCGCATTTGATTATGGGGATGTTGTGGAACTAACGGAGGATGATATTTTGAGGAAGGTTTTTCGCAGCGAAAATGATGCATACAAGTTTTATAAGAAATTAGGAAAATTTTACGGATTTGGTATTAGAAAGGGAGACATGTTCAAGGATGAGGAGGGTAATTTGGTTCGGAGAAGATTTTTTTGCAATAGAGAGGGACAGAGAGATAAGAAACATTATAACAGGGTCGATAGGAAGAGGCCTCACAAGCCGGAGACAAGGACGAATTGTGAAGCGAGGGTGTGTGTGTATCTAGATAAGGAAAGGTCGTTGTGGAGGGTCAAGAAAGTCATTTTGAACCACAACCATGAGATGACGCATCACAGAATGGTTCATCTAATTCCAAGTTTTCATTACATGACGGATGCTGCAAAAGCCCAAATAGAGGGATTTCAAGGATGTGGCATCTTAACATCGAAGACAATGCGGTATATGGCTGGCATATCTAGAGAGTATTCACTTGTAGGGTTTCTGAAGAAGGATGCTTACAACTACGTCGATAAGAGACATCGTGCAAGGATAACTGATGGAGACGCGAACGCAGCCATAGTGTACTTGGAGGGTAAAGTTGATGCAGACCCGACTTCGATGGCAAGGTATAATGTGACGAAGAACGAAATGCTAGCCAATTTATTTTGGGCGGATGGTGGCAACAGGATAGATTACCAATATTTTGGAGACGTACTGGCATTCGACTCAACTTACAGGAAAAACAAATACAAGAGGCCACTGGTGATTTTCTCAGGGTGCAATAACCACAAGCAAACGTGTATTTTTGGGTTTGGTTTGGTCTTAGATGAGAGTATTGCTTCATATAAATGGCTTTTCGAGAATTTCTTGGAGGTCATGTGTAACAGACAGCCGTTTGTTGTTCTTACGGATGGCGATGACTTAATTTGA 966 0.4193 MCEDGVGDTAAFDYGDVVELTEDDILRKVFRSENDAYKFYKKLGKFYGFGIRKGDMFKDEEGNLVRRRFFCNREGQRDKKHYNRVDRKRPHKPETRTNCEARVCVYLDKERSLWRVKKVILNHNHEMTHHRMVHLIPSFHYMTDAAKAQIEGFQGCGILTSKTMRYMAGISREYSLVGFLKKDAYNYVDKRHRARITDGDANAAIVYLEGKVDADPTSMARYNVTKNEMLANLFWADGGNRIDYQYFGDVLAFDSTYRKNKYKRPLVIFSGCNNHKQTCIFGFGLVLDESIASYKWLFENFLEVMCNRQPFVVLTDGDDLI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02577 321 Pfam FAR1 DNA-binding domain 38 128 IPR004330 -
Aip10g02577 321 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 24 318 IPR031052 GO:0006355
Aip10g02577 321 PANTHER OS02G0262500 PROTEIN 24 318 - -
Aip10g02577 321 Pfam MULE transposase domain 250 319 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02577 Aip-Chr10 113805408 113806373 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02577 FAR1 1.1e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02577 - - aip:107620865 660.988