Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02568 ATGAGTTCCCCAACAATTCAGTCACGGCAGTCATCAAAGGCGGTGAGGCAGGAGCCGCCTCGCGTTGATTCCGGTGGATGCTGTCGTCGAGTCAGAACTGCGGAGTCCACTACCTCGCCCTTGGACCTTCAGCAGCGCTATGACAGATTGGATGCTAAGGCGGCAGGGCTGGAAAAGGAGGTGCAAAGGCAAACAGAACTACGAGCGATGTATAGGAAAAGAATGGAAAGGACCCAAGACTACCTAAGGTACTGCCTCCAAGTTGCACAAGAAAAAGGAATCTTAGGCCTCATTGTCCAAAACAAAGGCGAATTTCAGCAAGCAATCAACTCCACTCCACCCATACCTCCCATCCCCACTCCACCTCCTCACCACCCCAATCTTGCCACCATTATTCATGAAGCCAAAATTGCTGGATGGTATATTCATCCAACCGAGATTCAGTTGGAAGAGAAAATAGGGCAAGGAACCACCGCAGTGATTCACAGAGGAACATGGCGCGGATGTGACGTGGCAGTGAAGTGCATAACATCGGAATTCTTCAACACAAATGCAAACGGCGTCGCATTCTTCGCTCAGGAGGTAGAAACCCTATCGAAGCAGCGCAACCGTTTCGTTCTCCACCTAATGGGCGCATGCCTTGAGCCACCTCATCACGCGTGGGTGGTGACGGAGTATCTTAGCAGCACCCTGAAAGAGTGGCTGCACGGCTCCGGCAGCAGGCGAAAGGGAAGAGGCGTGCCACTTCCTCCGTTGAAAGAAAGAGTGAGCAAGGCATTGGAGATCGCACAGGGCATGCAGTATCTCCATGAGCAGAAGCCAAAGCTCATTCACCGTGACTTGAAGCCTAGTAACATTTTCTTGGACGACGCCATGCATGTTCGTGTTGCTGATTTCGGACATGCTCGCTTCTTGGATGACCATGAAATGGCTCTCACTGGAGAAACAGGAACATACGTGTATATGGCACCTGAAGTGATAAAATGTGAGCCTTATAATGAAAAATGTGATGTGTACAGTTTCGGTGTCATACTCAACGAGCTTCTAACAGGAAAATACCCCTTCGTTGAGACAGATTTTGGTCCCGCCAAGATTGCAATGGAAGTAGTGGAAGGTAAGCTGAGGCCAATGCTTGCATCATCAACATCATTAGGGAATGAAAATGATGGTGATGATCACCATGACCAAGTGCAAGTGGAGGAACTCATTGATCTTATATGCCTTTGTTGGGACGGAAATCCATCTAAAAGGCCATCATTCGCAACTATTACTCGCACCCTCAAAAGCTATGTTAATTATAAATAA 1305 0.4866 MSSPTIQSRQSSKAVRQEPPRVDSGGCCRRVRTAESTTSPLDLQQRYDRLDAKAAGLEKEVQRQTELRAMYRKRMERTQDYLRYCLQVAQEKGILGLIVQNKGEFQQAINSTPPIPPIPTPPPHHPNLATIIHEAKIAGWYIHPTEIQLEEKIGQGTTAVIHRGTWRGCDVAVKCITSEFFNTNANGVAFFAQEVETLSKQRNRFVLHLMGACLEPPHHAWVVTEYLSSTLKEWLHGSGSRRKGRGVPLPPLKERVSKALEIAQGMQYLHEQKPKLIHRDLKPSNIFLDDAMHVRVADFGHARFLDDHEMALTGETGTYVYMAPEVIKCEPYNEKCDVYSFGVILNELLTGKYPFVETDFGPAKIAMEVVEGKLRPMLASSTSLGNENDGDDHHDQVQVEELIDLICLCWDGNPSKRPSFATITRTLKSYVNYK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02568 434 ProSiteProfiles Protein kinase domain profile. 147 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02568 434 Coils Coil 47 74 - -
Aip10g02568 434 MobiDBLite consensus disorder prediction 1 17 - -
Aip10g02568 434 Gene3D Phosphorylase Kinase; domain 1 141 228 - -
Aip10g02568 434 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 19 431 - -
Aip10g02568 434 PANTHER OS09G0443600 PROTEIN 19 431 - -
Aip10g02568 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Aip10g02568 434 ProSitePatterns Protein kinases ATP-binding region signature. 153 174 IPR017441 GO:0005524
Aip10g02568 434 CDD STKc_MAP3K-like 153 427 - -
Aip10g02568 434 SMART serkin_6 147 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02568 434 SUPERFAMILY Protein kinase-like (PK-like) 113 426 IPR011009 -
Aip10g02568 434 Pfam Protein kinase domain 148 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02568 434 MobiDBLite consensus disorder prediction 1 29 - -
Aip10g02568 434 Gene3D Transferase(Phosphotransferase) domain 1 229 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02568 Aip-Chr10 113201923 113203743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02568 100 431 MAP Kinase Kinase Kinase AT5G03730 33.918 1.05e-46 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Aip10g02568 Pkinase 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02568 - - ahf:112717789 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02568 10 113201923 113203743 Aip10g02568 10 113201923 113203743 ECH