Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02564 ATGATGATGATGATGAAGCGCCCGATGCTGCGGAGAATGGAGTTGCGGGAGCAAGATGACTACGAGGTTGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTCTTTAAGGGCGTTCACTCCACCGATAATGAAAAATGCATAATCAAGATCCTCAAACTCGTCAAGAAGAAAAAGTTAAAGAGGGAGATCAAAATATTACATAATCTTTGTGGAAGTCCCAATGTTATAAAGCTGCTTGACATTGTTAGGGACCAGCAATCAAAGACCCCAAGCCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTCTACCCCACCCTGTCAGATTATGATATTCGATATTATATCTATGAACTTCTAAAGTCTTTGAAGATAATACAATCAAGGCAAGGAGATATTGGGAACTACTACGGTGTTCAGCTTCTTGATGCTTCAGTGACAAAATACCAAGATTATGGTCACTAA 474 0.3945 MMMMMKRPMLRRMELREQDDYEVVRKVGRGKYSEVFKGVHSTDNEKCIIKILKLVKKKKLKREIKILHNLCGSPNVIKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKSLKIIQSRQGDIGNYYGVQLLDASVTKYQDYGH 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02564 157 PANTHER BNAA04G13490D PROTEIN 17 132 - -
Aip10g02564 157 ProSitePatterns Protein kinases ATP-binding region signature. 27 57 IPR017441 GO:0005524
Aip10g02564 157 PANTHER CASEIN KINASE II SUBUNIT ALPHA 17 132 IPR045216 GO:0004674|GO:0006468
Aip10g02564 157 ProSiteProfiles Protein kinase domain profile. 21 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02564 157 Gene3D Phosphorylase Kinase; domain 1 11 97 - -
Aip10g02564 157 SUPERFAMILY Protein kinase-like (PK-like) 11 132 IPR011009 -
Aip10g02564 157 Pfam Protein kinase domain 21 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02564 157 SMART serkin_6 21 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02564 Aip-Chr10 113162606 113164019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02564 19 133 Core Cell Cycle Gene Families AT3G48750 29.600 9.17e-07 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Aip10g02564 Pkinase 2.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02564 K03097 - zju:107409035 185.267