Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02531 ATGATGCACATGACCTTCTATTGGGGCAGGTACGTTACGATTCTCTTCGATTCGTGGAAGACCGATTCGTGGCTGAGTTACGCGCTGAGCTTGTTGGCGTGTCTCGTGGTCGCGATTTTCTACCAGTATCTTGAGAACCGCCGCATTCGCTTGAAGCTGTTCGCCACGGGGATTCCATCTTCGGCGGCGGCGCCAGAGATCGAGGCGCCTCTGCTGCGGCGGAAGTTGGCGGGGGAGAGAGCGAGGTTGGGAGTGAAGGTTGCGGGATCGGTGCTGTTTGGGGTGAGCTCGGCGATCGGGTATTTGCTGATGCTGGCGGTGATGTCATTCAACGGTGGGGTGTTTCTGGCCATCGTTTTGGGTCTTGCAATTGGCCATTTCATTTTCAGGAATGAGGGTGAAGCTTCCGTTGTTGTTGATAGTTCTTGTGCCTGTGCTTAA 441 0.5488 MMHMTFYWGRYVTILFDSWKTDSWLSYALSLLACLVVAIFYQYLENRRIRLKLFATGIPSSAAAPEIEAPLLRRKLAGERARLGVKVAGSVLFGVSSAIGYLLMLAVMSFNGGVFLAIVLGLAIGHFIFRNEGEASVVVDSSCACA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02531 146 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 146 IPR007274 GO:0005375|GO:0016021|GO:0035434
Aip10g02531 146 Pfam Ctr copper transporter family 4 129 IPR007274 GO:0005375|GO:0016021|GO:0035434
Aip10g02531 146 PANTHER CTR FAMILY COPPER TRANSPORTER 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02531 Aip-Chr10 112209752 112210836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02531 1 146 Inorganic Solute Cotransporters AT5G20650 54.667 2.81e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02531 K14686 - gmx:100815028 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02531 10 112209752 112210836 Aip10g02531 10 112209752 112210836 ECH
Aip06g03513 06 132356728 132357548 Aip10g02531 10 112209752 112210836 ECH
Aip09g01228 09 19229913 19236387 Aip10g02531 10 112209752 112210836 ECH