Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02512 atGAACTCTGCTGGGCTTTGCGAATTGGGCTGCTCACTTCAGCGCTCCCCAATCCTTACTCACGCCGCATTGCAGGAAAGCCTCCTGCATCCTGATTCTGCGACGCGTCTTGGGGGCCAACTTAGAGGCAACTgtgCTTCATACTCCATTCACACTCCAAATCTTGCTCCTCAGCGCCGCATTCTTCCATCACCGCTGTTCCATAACCACAATCATCCACCGCATTCTTCCATCATCAACACCTTTGGGACTTCCATCACTCTTGTCGTTATCAATCATCACTCTCGCCAAGCAGAAGAGAATACATGGTCTGATGTCGAAGTTTTGAGGTTAGCAGCTGCAGTAGAATCAAATTCAGTACATCCAGTTGGGAAAGCTATTGTGGATGCTACTCAGAAAGTTAATTGTACTAACGCTAAGCACCAAATCAAAGGAGCTAAACCTAGCATTCCCCCCTCCGTTGACAAGCTTCTTCTTCTCCTTCCCTCACCTACAGCACCACCGCCGGCCACCCTAACCGCCGCAGCTACCTTCTCCTTCTTCTCCTCTTTTTTAAACACTGAACCAGTAGAACACAGCCCCTCTCTCTCTCGTTCTTTCTCGTTCGCAGAACAAAGCAACCTCAAGCTCCACCACCACCGCCCCTCAAGCTCGCATATCTTCTCAGCGCTACAGCCATCATCTCCTCCAATCAATGTCGCGGCTACCTTTGCGCAAGCCCTAGCTCCGTGGCGACCAAAATCGGTTCCTCCAATCTTTGTTGCCACTTGGAATGTAGCAAGGAAGTCACCTCCAAGTTATTTGAACCTTGAAGATTGGCTTCACACCTCTCCACCCGCTGATATCTATGTTCTTGGTTTCTTCTCTTACCAGGGCTCAAATTTGTTCATAGGATATATCGGGGATTCTCGAGCAGTGATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACCATTGATTTGAAGCCCGATTTGCCAAGTTTGTTATTTGCATCAAAATTCATACTATCTCTTTGTTCCATGTATGATTTTCGCATCAGAATTCATCCTTATGCCTTGATGAGCAATGAAAAGGTGGTTGAGATAGTATCTTCGGCACCAACACGGTCATCAGCTGCAAGGATTCTGGTAGATGCTGCAGCCCGGGAGTGGAAACTTAAGTATCCGACTTCAAAGATGGACGATTGCGCTGTGGTCTGCCTATTTTTGGATGGCAAAGATGGTGTTTCTGATATTGTTTCTGCAGCAAAGGTTGCTGCAGTGGCACATCCATTAGCTGAAAAAGCTGAAGAGATTGCTTCCAATATCAGTTACCATGCTCAGTTCAGTCCTCATTTTTCCTGTCTCAAGTTTGAGCTAGAGCAAGCTTACTATGCCACTGCTGAGAGTGTTCGAGATCGTCTCATAAGGAGCTGGTACCAGGAGGTATCAAAGCTAAAGGCAAAGTATGAGTCTCTACAAAGGACTCAGAGGCACTTGCTTGGGGAAGATCTTGGACCATTGAGCATAAAGGAGCTGCAGAATCTTGAGAAACAGCTAGAAGGTGCTTTAGCACAGGCTAGGCAGAGGAAGGTTGCAGATGGAACATTCCTTGAAGAACCTGGTTCTGGTGCAGTAGCAACTGTTGATAACAAAAATGTCTTTGTTGGGACATTGGATTGGATCACCAGACCTGGTCGCAAGGTTGGAAAAGCTAAAGATCATTGGTTAGACGAACGGGACAAGGCTGCAGCTCATTTGCATATTCTACTCAATGAAAGCAAAGTTAGCCCTTTCTATATGAAAAAAATCGATAACACCGGTGTGTATGTCAAAGGTGATGCAGGCAACGGGGAAAGTGATTGGTTTGGATTATTAGAAGATATACTCGAGCTTGAATACACTGGTGATGACTCTAATCGAGTTGTTTTGTTCAAATGTCAATGGTATGATCCAAGTCGTCCAAATGGAACACGTATTCATAATGACTACAAAATAACTGAAGTCAACCATAGCAAAAGATATCGCCATTATGATCCTTTCATTGTCGCCCAAAAAGCTAAACAAGTTTACTTCTTACCTTATCCTGGAAATTGCAAGTCTATGTGGCATGTTGTTGTAAACACTAAACCAAGAGGTCGAATTGAAACCAATCATGTACATGTAGATGAGGATGAGGATGAGAATAATGTAGCTTATCAAGTGGATGAGAGCAATCCTTCTAGGATTTCAGACACTGAGCCTCCTATTAGTCTTAAGTCTCCATTTGGAGAGGACCGCATTGTCGAATTGTCCATCGGCTCTAGTTCTGGAGCTAATAAAAATGAATATGATGATGTTGCAGACTTTGATGATGATATCGATTTTTAA 2361 0.4464 MNSAGLCELGCSLQRSPILTHAALQESLLHPDSATRLGGQLRGNCASYSIHTPNLAPQRRILPSPLFHNHNHPPHSSIINTFGTSITLVVINHHSRQAEENTWSDVEVLRLAAAVESNSVHPVGKAIVDATQKVNCTNAKHQIKGAKPSIPPSVDKLLLLLPSPTAPPPATLTAAATFSFFSSFLNTEPVEHSPSLSRSFSFAEQSNLKLHHHRPSSSHIFSALQPSSPPINVAATFAQALAPWRPKSVPPIFVATWNVARKSPPSYLNLEDWLHTSPPADIYVLGFFSYQGSNLFIGYIGDSRAVMGSKDSNDSMVAIQLTIDLKPDLPSLLFASKFILSLCSMYDFRIRIHPYALMSNEKVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKDGVSDIVSAAKVAAVAHPLAEKAEEIASNISYHAQFSPHFSCLKFELEQAYYATAESVRDRLIRSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSIKELQNLEKQLEGALAQARQRKVADGTFLEEPGSGAVATVDNKNVFVGTLDWITRPGRKVGKAKDHWLDERDKAAAHLHILLNESKVSPFYMKKIDNTGVYVKGDAGNGESDWFGLLEDILELEYTGDDSNRVVLFKCQWYDPSRPNGTRIHNDYKITEVNHSKRYRHYDPFIVAQKAKQVYFLPYPGNCKSMWHVVVNTKPRGRIETNHVHVDEDEDENNVAYQVDESNPSRISDTEPPISLKSPFGEDRIVELSIGSSSGANKNEYDDVADFDDDIDF 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02512 786 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 357 412 - -
Aip10g02512 786 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 291 330 - -
Aip10g02512 786 Gene3D - 355 414 IPR036457 -
Aip10g02512 786 ProSiteProfiles K-box domain profile. 473 580 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aip10g02512 786 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 101 140 IPR023299 GO:0000166
Aip10g02512 786 Coils Coil 473 493 - -
Aip10g02512 786 Gene3D - 284 332 IPR036457 -
Aip10g02512 786 Gene3D Glycogen Phosphorylase B; 421 518 - -
Aip10g02512 786 MobiDBLite consensus disorder prediction 764 786 - -
Aip10g02512 786 Coils Coil 507 530 - -
Aip10g02512 786 Pfam Domain of unknown function (DUF4216) 628 703 IPR025312 -
Aip10g02512 786 Gene3D - 84 151 IPR023299 GO:0000166
Aip10g02512 786 PANTHER ALPHABET, ISOFORM E-RELATED 357 412 - -
Aip10g02512 786 SUPERFAMILY PP2C-like 290 409 IPR036457 -
Aip10g02512 786 MobiDBLite consensus disorder prediction 734 753 - -
Aip10g02512 786 Pfam K-box region 475 528 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aip10g02512 786 PANTHER ALPHABET, ISOFORM E-RELATED 291 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02512 Aip-Chr10 111657503 111678172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02512 253 410 PP2C-type Phosphatase Gene Family AT1G03590 41.429 8.05e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02512 - - ahf:112763862 387.111