Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02500 ATGGTGATGAAGAATAACGTTAGAAAATTGTTGGGTTTTGTTTACTCTATGAACTTGGTTGTGTTGTTGGGTGTGGCGGCAATGGCAGAAAGAGAAGTGAAAGTGGGAGCGGTGCTTGATGTTGGGGTTGGAATGGTTGGGAAGATGGGTTTAAACAGCATCAGAATGTGCATCCATGATTTCTATGTCTCTAATCCTCATTACAAAACCAGGCTCCAACTTATTCTTAGGGATTCCCAAAGGAACGTTGTTACTGCTGCTGCTCAAGCTTTAGATCTCATAAAGAATGAGCAAGTGGAAGCTGTGATAGGACCAGTTACAACAACGGAAGCCATGTTTGTGATCAACCTCGGAGACAAAGCGCACGTGCCCATTGTCACGTTCTCAGCAACGAGTCCTTCTCTCTCATCCCTCCACACCCCATATTTCTTCCAAATTGCTCAGAAAGATTCAACTCAGGTAGAAGCCATAAGCGCCATTATCCAAGCTTTTCGGTGGAAAGAAGTGGTTCCAATTTATGTAGACAACAGTTATGGCGAAGGACTCATTCCATGGTTAACTAATTCACTTCAAAAAGCATACATCCGTGTTCCTTATCTGTCTGCCATTGATTTCTCAGCCACAGATGATGCCATTGAAAGAGAGCTCTACAAGCTCATGACTATGCAAACTAGAGTCTTTGTCGTTCACATGACACCCCTTCTTGGCTCTCGTCTCTTTGCCATTGCCAAAACCATTGGCATGATGGATCAAGGTTATGTTTGGATTGTCACTGATGGAATGGCTAATTTCTTCAACTCGTTGGACTCTTCAGTTATGGACTCCATGGAAGGTGTCTTGGGTGTTAGGCCTTATATTCCAAGAACTAAACAGTTTCTTGATTTTAGAGCTCGATGGAAACGACAGTTCCTAAGAGACAATCCAACACTTGTTGATGTCAATCTGAATGCTTTTGGAATATGGGCCTATGATGCTACCACCGCATTGGCCATGGCCGTTGAGAAAGTTGACAGCACCCTTTCTGGCTTCACTAATGTGAGCAAGAACTCAAGCAATGTGACTGATCTTGAAAACTTTGGCGTTTCGCGAAATGGTGAGAAGCTGAGAGAAGCTTTGTCAAATGTTAGATTCAAAGGTGTTGGTGGTGACTTCAAATTAGTTGGTGGTGGGGAGTTACAAGCATCAGCATTTGAGATAGTTAATGTGATTGGTAATGGTGAAAAAAACATTGGATTTTGGATGCCAGAAAAGGGACTAATTAGAAGTATGGATGCCAAAACTGCAACAACCGCATATTCAAGTTCTAAAGAGAATCTAGGAAGAATTATATGGCCAGGGGACTCTTACTCTATTCCAAAGGGATGGCAGATTCCCACAAATGGTAAAAAGTTAATGATAGGGGTTCCAGTAAAAGATAGTGGCTACTCTGAATTTGTGAGAATAATCCATGACCCTATTACTAATTCTACAAAGGTCACTGGGTTCTGCATTGATGTCTTCAATGCTGTGGTAGAAGCCTTGCCTTATGCCCTTTCATTTGACTTGATTCCATTTGAAAACTCCAACGGTGAGATGGCAGGAACTTATGATGATTTGGTCAACCAAGTTTATTATGGGAAGTTTGATGGTGTGGTGGGAGATACAACAATTACGGCAAACAGGTCCAGTTATGTTGATTTCACATTGCCGTACACAGAATCTGGTGTGACTATGGTTGTTCCAATAAAAGACAACAGAAAGAAGAATGCATGGGCCTTCTTGAAGCCATTGACATGGGACCTTTGGGTTACAACATTTTGTTCATTTGTATTCATAGGATTCGTTGTTTGGGTTCTTGAACACCGAATTAACAACCATTTCAGAGGGCCTCCTTCTTATCAGATTGGCACTAGCCTGTGGTTTTCCTTCTCAACCATGGTGTTTTCCCATCGGGAGAGGGTAGCAAGCAACTGTGGAAGATTCGTGGTGATAGTATGGGTTTTTGTGGTTCAAATTCTAGTTCAAAGCTACACTGCAAGTCTTACCTCTCTCTTAACGGTTGAACAATTACGCCCGGTTATTACCGATGTGCATCAACTCCTAAAGAATCGGTTGAATGTTGGTTATTTGGATGGTTCTTTTGTTCGTGAAATCTTGAAGGATTTGGGATTCCAAGAAAGCCAGCTCAGGATTTACAGATCTGCAGAAGAATGCAATGATCTCTTCATAAAAGGAACTGCAAATGGTGGCATTGATGCTGCGTTTGATGAAGTTCCATATGTGACACACCTTCTTCAAATTTACTGCTCTAAGTATACCATGATTGAGCCAAGATTTAAAACTGGTGGCTTTGGATTTGTGTTTCCAAAAGGGTCACCTCTTGTAGCAGACATATCAAGGGCAATTTTGAATGTGACTCAAGGAGCCAAAATGAAAACAATTGAGAATGCATGGTTGAATGGAAGCAGTTGTCCAGAATCTAATGCTCAAATTTCTTCTGCGAGTCTAGGACTCGAAAGCTTCTGGGGTCTGTTTCTTGTTATAGGTGTTTCTTGTGCATTAGCACTCATGTTCTTCTTAGCAACATTCCTGTATCAGTATAGACATATTCTGTCAAGCCATCAGCCCAGTACTTCAATATGGACAAGAATTGGAACCTTGCTAAGTATCTTCAATGAGAAAGACTTGAGCTCTCACACTTTCAAGAAAAGTGCAAAGCAAGATGCAAGTGTAGCTAGTAGTCCTGCTCATCATCATGGAATAGGTTCAGCTGAGGCATCACCAAGTACACATTGCCCTTCAAGTCCTTATAGCTACACAGAATCAAATTTTTCATTCTATGGAGACCAAGTAATGTTTAGTCCGGATCGACATGATTATGGAACTCATCAAGGTCATGAAACTCAAGACAGAGAAATGAGGGTGGTGCACGATGATACTCAAGAAGTGGCCACTACAAACAGTAATAATACTAACTCCCAAGCCACATAG 2970 0.4158 MVMKNNVRKLLGFVYSMNLVVLLGVAAMAEREVKVGAVLDVGVGMVGKMGLNSIRMCIHDFYVSNPHYKTRLQLILRDSQRNVVTAAAQALDLIKNEQVEAVIGPVTTTEAMFVINLGDKAHVPIVTFSATSPSLSSLHTPYFFQIAQKDSTQVEAISAIIQAFRWKEVVPIYVDNSYGEGLIPWLTNSLQKAYIRVPYLSAIDFSATDDAIERELYKLMTMQTRVFVVHMTPLLGSRLFAIAKTIGMMDQGYVWIVTDGMANFFNSLDSSVMDSMEGVLGVRPYIPRTKQFLDFRARWKRQFLRDNPTLVDVNLNAFGIWAYDATTALAMAVEKVDSTLSGFTNVSKNSSNVTDLENFGVSRNGEKLREALSNVRFKGVGGDFKLVGGGELQASAFEIVNVIGNGEKNIGFWMPEKGLIRSMDAKTATTAYSSSKENLGRIIWPGDSYSIPKGWQIPTNGKKLMIGVPVKDSGYSEFVRIIHDPITNSTKVTGFCIDVFNAVVEALPYALSFDLIPFENSNGEMAGTYDDLVNQVYYGKFDGVVGDTTITANRSSYVDFTLPYTESGVTMVVPIKDNRKKNAWAFLKPLTWDLWVTTFCSFVFIGFVVWVLEHRINNHFRGPPSYQIGTSLWFSFSTMVFSHRERVASNCGRFVVIVWVFVVQILVQSYTASLTSLLTVEQLRPVITDVHQLLKNRLNVGYLDGSFVREILKDLGFQESQLRIYRSAEECNDLFIKGTANGGIDAAFDEVPYVTHLLQIYCSKYTMIEPRFKTGGFGFVFPKGSPLVADISRAILNVTQGAKMKTIENAWLNGSSCPESNAQISSASLGLESFWGLFLVIGVSCALALMFFLATFLYQYRHILSSHQPSTSIWTRIGTLLSIFNEKDLSSHTFKKSAKQDASVASSPAHHHGIGSAEASPSTHCPSSPYSYTESNFSFYGDQVMFSPDRHDYGTHQGHETQDREMRVVHDDTQEVATTNSNNTNSQAT 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02500 989 MobiDBLite consensus disorder prediction 973 989 - -
Aip10g02500 989 MobiDBLite consensus disorder prediction 950 989 - -
Aip10g02500 989 CDD PBP1_GABAb_receptor_plant 34 423 IPR044440 -
Aip10g02500 989 SUPERFAMILY Periplasmic binding protein-like II 442 814 - -
Aip10g02500 989 SUPERFAMILY Periplasmic binding protein-like I 26 446 IPR028082 -
Aip10g02500 989 SMART GluR_14 465 814 IPR001320 GO:0015276|GO:0016020
Aip10g02500 989 MobiDBLite consensus disorder prediction 952 972 - -
Aip10g02500 989 PIRSF IGluLR_plant 4 938 IPR017103 -
Aip10g02500 989 Pfam Bacterial extracellular solute-binding proteins, family 3 489 813 IPR001638 -
Aip10g02500 989 Gene3D - 151 463 - -
Aip10g02500 989 Gene3D - 464 582 - -
Aip10g02500 989 Gene3D - 725 819 - -
Aip10g02500 989 Gene3D - 287 392 - -
Aip10g02500 989 Gene3D - 583 713 - -
Aip10g02500 989 MobiDBLite consensus disorder prediction 900 927 - -
Aip10g02500 989 Pfam Ligand-gated ion channel 814 844 IPR001320 GO:0015276|GO:0016020
Aip10g02500 989 CDD GluR_Plant 462 812 - -
Aip10g02500 989 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 909 - -
Aip10g02500 989 Pfam Receptor family ligand binding region 59 404 IPR001828 -
Aip10g02500 989 PANTHER GLUTAMATE RECEPTOR 2.9 33 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02500 Aip-Chr10 111260586 111265528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02500 32 970 Ion Channels AT2G29120 49.947 0.0 898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02500 K05387 - pvy:116139285 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02500 10 111260586 111265528 Aip10g02500 10 111260586 111265528 ECH