Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02499 ATGATGAAAGGGATGAAGCATATTATTATTGTGATTGTTATTATGGGTTTGATGTTGTTGTGGCCTTGTCCATCATCAGCAGAGAAGACAGTGATTAATGTTGGAGTAGTGCTTGATCTTAGTGAAACAGTGGGGAAGATTGGATTGAGTTGCATCAACATGTCCCTTTCGGATTTCTATGATTCTCATCCTCATTACAACACCAGGATGCTCCTCCATGTCAGAGACTCTCAAACTGATGTTGTTACCGCTGCTTCTGCAGCTGTAGAGTTGATGAAAAAGGAGAAAGTGGAAGCAATAATGGGACCAGTAACATCAATGCAAGCAAGCTTTGTTGTGAATCTTGGAGACAAAGCTCACGTTCCAATCATATCCTTCACCGCAACAAGCCCTTCTCTAACATCGCTTGGCAGTTCCTACTTCTTTCGAATTGCACAAAATGATTCTACTCAAGTACACGCCATAAGCGACATCATCCAATCCTTCGGGTGGAGACAAGCAGTTCCTATCTACATCGACAACGACTATGGCCGCGCCATTATTCCCTTCTTAACCAATTCCCTTCAACAAGCAAATATCAGGGTCCCATACCTCGCTGTTATTCCTCCCTCCGCCACCACCGATCACATTGAAGAACAGCTTTACATGCTTATGACCATGGAAACTAGGGTTTTTGTTGTTCATATGGTGGGGAATCCTGGGTCCACTCTCTTTGCCATTGCGGATCGGATTGGAATGATGAAACAAGGCTATGTTTGGATTGTAACCAATGGTATGGCTAATACTTTGGCCTCTCTTGACTTCTCGGATATTCAAGCGATGCAAGGTGTGTTAGGAGTGAAAACATATGTTCCTAAAACCAAAAGGGTTGTTGATTTCCAAGCACGTTGGAAGAGGCGTTTCTTGCAGGACAATCCAGCCATGGTTGATGCAAGCATCAATGTGTTTGGATTATGGGCTTATGATGCCTCAACCGCGCTCGCAAGCGCCGTTGAGAGGGCTAATAATAATAATTCGAAACCCGGATTTCAAAACACCACAAATAATGCTTCCAGCAATTTCAGTGAGATTGACAATGTAGGAGTATCGGAGAGGGGTGAAGAATTGCGGGACGCTTTATCGGACACCAGATTCAGCGGCCTGGCCGGCCAATTCGGCCTTGTCAATGGAGAATTAGAAGCTGCAACTTTTCAGATAATTAACGTAAATGGTAATGGAGAAAAGGTGATAGGATTTTGGACACCACAGAAGAGATTAACAAGGAATCTTAGCAGCCTAATAAAAAGTAGTACAACTGATTTGAATAATAATCATGATAATGTTCTAGGAGCAATGATATGGCCAGGGGATAGTTATTCAGTTCCAAAGGGGTGGGAGATACCAACAAATGGGAAGAAATTGAGGATTGGAGTTCCGGTGTCATCAAGGCCTCAATTTGTGAAGGTGGAAAATGATGGTGAAACTAACACAACAAAGGTAACTGGTTTTAGCATTGATGTGTTTGAAGCGGTGGTGCAAGCTTTGCCTTATGCTTTGCCATACCAATTCATTCCTTTTGCAAAACCCAATGGGGAGAGCGCCGGCACCTATGATGATTTAATCATGCAGGTGTTTGATGCTGTGGTGGCAGACACAACGATTATAGCAAACAGGTCAAAGTACGTTGACTTCACGTTGCCGTATACAGAGTCAGGAGTATCAATGGTGGTGCCAGTGAAAGACAAGAGCAAGAAGGGTGCATGGGTGTTCCTAAAGCCTCTAACCTGGGATCTATGGATGACCACTGGTTGTTCCTTCGTGTTCTTTGGATTCGTGGTGTGGGTTCTTGAGCATCGCATCAACAAAGATTTTCGTGGCCCTCCTTCTCACCAGATCGGCACCAGTTTGTGGTTTTCTTTTTCCACCATGGTCTTTGCTCATCGAGAAAAAGTAGTGAGCAACACTGCACGGTTTGTTGTGATAATATGGGTATTTGTGGTGCTGATTTTGACTCAGAGTTACACAGCAAATTTATCATCACTACTAACAGTGGAGCAACTTCGACCAACAGTGACCAATGTAAATGATCTAATAAAGTATAGAACACGTGTTGGGTACCATACAGGTTCTTTTGTTCGTGGGATCTTGCTCAACCTTGGTTTCAAGGATTTTCAGCTCATAACTTATAATTCCACAGCACAATGTGATGATCTTCTCAGCAGAGGCAGTCAAAACGGTGGAATTGCTGCTGCATTTGATGAAATTCCTTACATTAGGATTCTTCTTGGAACCTATTGCTCTAAGTATACCATGGTGGACCCCACATTTAAAACCGATGGCTTTGGCTTTGTATTCCCAAAAAGTTCTCCTCTGGTGGGTGATGTATCAAGGGCAATTCTGAAAGTAACTGAAGATCCAAGAATGAAAGAAATAGAGAGTGCATGGTTTGAGAAGCGAAGTAGTTGCCAGCAAGAAGATGCATCAGTGTCTTCTTCTAATAGTCTTGGCCTAGACAGCTTCTGGGGCCTATTTCTCATTGCTGCATTGGCTTCCATTTCAGCACTCCTCATCTTTGCAGTTACATTCTTGTATGATCATAGACATCAATGGTGGTTCATCAATAATGATTATTCAACATGGAAGACTCGAATCCGCATCTTGCTGAGAATCTTCGACCAGAGAGACCCTAGGTCTCAAAGATTCAGGAGCGGTGGTACTGATTCAGTTAAGGAAGAAGATAGACACAATTATGATCAAAATAGCAGCACCATTGGTCGTCATCATCATCATCTTCATGATCATAGCTTAGATGCTGCTTCCACCTACACAGAATCCAGCTTCTCCTTTCAAGGATCACCTTGTGAAGACAGCAATAGTGATCATAATAATAATGTAGAGCAAAATAATTTGCGTAGTCAACCATCTCAACAAGAAAACTGA 2919 0.4275 MMKGMKHIIIVIVIMGLMLLWPCPSSAEKTVINVGVVLDLSETVGKIGLSCINMSLSDFYDSHPHYNTRMLLHVRDSQTDVVTAASAAVELMKKEKVEAIMGPVTSMQASFVVNLGDKAHVPIISFTATSPSLTSLGSSYFFRIAQNDSTQVHAISDIIQSFGWRQAVPIYIDNDYGRAIIPFLTNSLQQANIRVPYLAVIPPSATTDHIEEQLYMLMTMETRVFVVHMVGNPGSTLFAIADRIGMMKQGYVWIVTNGMANTLASLDFSDIQAMQGVLGVKTYVPKTKRVVDFQARWKRRFLQDNPAMVDASINVFGLWAYDASTALASAVERANNNNSKPGFQNTTNNASSNFSEIDNVGVSERGEELRDALSDTRFSGLAGQFGLVNGELEAATFQIINVNGNGEKVIGFWTPQKRLTRNLSSLIKSSTTDLNNNHDNVLGAMIWPGDSYSVPKGWEIPTNGKKLRIGVPVSSRPQFVKVENDGETNTTKVTGFSIDVFEAVVQALPYALPYQFIPFAKPNGESAGTYDDLIMQVFDAVVADTTIIANRSKYVDFTLPYTESGVSMVVPVKDKSKKGAWVFLKPLTWDLWMTTGCSFVFFGFVVWVLEHRINKDFRGPPSHQIGTSLWFSFSTMVFAHREKVVSNTARFVVIIWVFVVLILTQSYTANLSSLLTVEQLRPTVTNVNDLIKYRTRVGYHTGSFVRGILLNLGFKDFQLITYNSTAQCDDLLSRGSQNGGIAAAFDEIPYIRILLGTYCSKYTMVDPTFKTDGFGFVFPKSSPLVGDVSRAILKVTEDPRMKEIESAWFEKRSSCQQEDASVSSSNSLGLDSFWGLFLIAALASISALLIFAVTFLYDHRHQWWFINNDYSTWKTRIRILLRIFDQRDPRSQRFRSGGTDSVKEEDRHNYDQNSSTIGRHHHHLHDHSLDAASTYTESSFSFQGSPCEDSNSDHNNNVEQNNLRSQPSQQEN 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02499 972 CDD GluR_Plant 465 809 - -
Aip10g02499 972 Pfam Bacterial extracellular solute-binding proteins, family 3 489 810 IPR001638 -
Aip10g02499 972 Gene3D - 760 817 - -
Aip10g02499 972 SUPERFAMILY Periplasmic binding protein-like I 27 459 IPR028082 -
Aip10g02499 972 SMART GluR_14 468 811 IPR001320 GO:0015276|GO:0016020
Aip10g02499 972 MobiDBLite consensus disorder prediction 940 972 - -
Aip10g02499 972 Gene3D - 346 467 - -
Aip10g02499 972 Pfam Ligand-gated ion channel 811 843 IPR001320 GO:0015276|GO:0016020
Aip10g02499 972 PIRSF IGluLR_plant 2 951 IPR017103 -
Aip10g02499 972 Gene3D - 468 579 - -
Aip10g02499 972 SUPERFAMILY Periplasmic binding protein-like II 442 810 - -
Aip10g02499 972 Gene3D - 580 708 - -
Aip10g02499 972 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 908 - -
Aip10g02499 972 MobiDBLite consensus disorder prediction 891 923 - -
Aip10g02499 972 CDD PBP1_GABAb_receptor_plant 33 423 IPR044440 -
Aip10g02499 972 Gene3D - 149 314 - -
Aip10g02499 972 Pfam Receptor family ligand binding region 51 405 IPR001828 -
Aip10g02499 972 PANTHER GLUTAMATE RECEPTOR 2.9 32 908 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02499 Aip-Chr10 111251534 111257608 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02499 11 952 Ion Channels AT2G29120 47.954 0.0 876
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02499 K05387 - pop:18107523 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02499 10 111251534 111257608 Aip10g02499 10 111251534 111257608 ECH