Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02494 ATGGTGAAGAATCAGCGTCCTACAACCTTGGTTCTAAGTCTCTTCTGGTGGTTCTTTGGTGTGGTAGCAACAGTGATGGGTCAAAGAAACAGAGAGGCAACAACACTATTCCAAACAAGAGTAGTGAAAGTGGGAGTGGTGCTTGATTTAGGTGGGGGAATCGTAGGAAAGATGGGTTCAAACAGTATCAGAATGTGTGTCAATGATTTCTATGATTCTCATCCTCATTACAAAACTAGGCTCCAACTTATCCTTAGGGACTCCCAAAGGGACATTGTTACTGCTGCTGCTCAAGTTGTAGATCTCATAAAGAATGAGCAAGTGGAAGCTGTGATAGGACCAGTTACAACAATGGAAGCCATGTTTGTGATCAACCTCGGAGACAAAGCGCACGTGCCCATTGTCACGTTCTCAGCAACGAGCCCTTCTCTCTCATCCCTCCACACCCCATATTTCTTCCAAATTGCTCAGAAAGATTCGACTCAGGTAGAAGCCATAAGCGCCATTATCCAAGCTTTTCGGTGGAAAGAAGTGGTTCCAATTTATGTGGACAACAGTTATGGCGAAGGACTCATTCCATGGTTAACTAATTCACTTCAAAAATCATACATCCGTGTTCCTTATCTGTCTGCCATTGATTTCTCAGCCACAGATGATGCCATTGAAAGAGAGCTCTACAAGCTCATGACTATGCAAACTAGAGTCTTTGTCGTTCACATGACACCCCTTCTTGGCTCTCGTCTCTTTGCCATTGCCAAAACCATTGGCATGATGGATCAAGGCTATGTTTGGATTGTCACCGATGGAATGGCTAATTTCTTCAACTCGTTGGACTCTTCAATTATGGAATCCATGGAAGGTGTCTTGGGTGTTAGGCCTTGCATTCCAAGAACTAAACAGTTTCTTGATTTTAGAGCTAGATGGAAACGACAGTTCCTAAGAGACAATCCAACACTTGTTGATATCAATCTGAATGCTTTTGGAATATGGGCCTATGATGCTACCACCGCATTGGCCATGGCCGTTGAGAAACTTGACAGCACCCTTTCTGGCTTTACTAATGTGAGCAAGAACTCAAGCAATGTGACTGATCTTGAAAACTTTGGCGTTTCGCGAAATGGTGAGAAGCTGAGAGAAGCTTTGTCAAATGTTAGATTCAAAGGTGTTGGTGGTGACTTCAAATTAGTTGGTGGTGGGGAGTTACAAGCATCAGCATTTGAGATAGTTAATGCTATTGGTAACGGGGAAAGAAACATTGGATTTTGGATGCCAGACAAGGGACTAATTAGAAATATGAATGCCAAAAATGCAACAACTGCATATTCAACTTCTAAGGAGAATCTAGGAACAATTATATGGCCAGGGGACACCTACTCTGTTCCAAAGGGATGGCAGATTCCCACAAATGGTAACATGTTAAAGATAGGGGTTCCAGTGAAAGATTGTGGCTACACCGAATTTGTGAAAATAATTCATGACCCTATTACGAATTCTAGAAAGGTCACTGGATTCTGCATTGATGTCTTCAATGCTGTGGTAGAAGCCTTGCCTTATGCCCTTCCATTTGAATTCATTCCATTTGAAAAGTCCAACGGTGAGATGGCAGGAACTTATGATGATTTGATCACCCAAGTTTATTATGGGAAGTTTGATGCTGTGGTGGGGGATACAACGATTACGGCAAACAGGTCCAATTTTGTTGATTTCACGTTGCCGTACACAGAATCTGGTGTGACTATGGTGGTTCCAATAAGAGACAACAGAAAGAAGAATGCATGGGCCTTCTTGAAGCCATTGACATGGGACCTTTGGGTTACAACATTTTGTTCATTTGTATTCATAGGATTTGTTGTTTGGGTTCTTGAACACCGAATCAACAACCATTTCAGAGGGCCTCTGCCTTATCAAATTGGCACTAGCTTGTGGTTTTCCTTCTCAACCATGGTTTTTTCTCATCAGGAGAGAGTGGAGAGCAACTGTGGAAGATTTGTGGTGATAGTATGGGTTTTTGTGGTTCAAATTTTGGTTCAAAGCTACACTGCAAGCCTTACCTCTCTCTTAACAGTTGAACAACTACGTCCAGCGAATACTGATGTTCATCAACTCCTAAAGAATCGGTTGAATGTTGGTTATCTAGAAGGTTCTTTTGTTCGTGGAATGTTGAAGGACATGGGATTCAAAGATGAGCAGCTCAAGGTTTATAATTCCGTAGAAGAATGCAATGACCTCTTCACCAAAGGAAGCGCCAATGGCGGCATTGACGCGGCGTTCGACGAAGTCCCCTACGTGATGCGCCTCCTTCAGACTTATTGTTCCAAGTATGCCATGGTTGAGCCAAGATTTAAAACTGGTGGCTTTGGCTTTGTGTTTCCAAGAGGGTCACCTCTTGTGGGAGACATATCAAGGGCAATATTGAATGTGATGAGACAAGGAAGCAACATGAGAAGAATTGAGAATGCATGGTTGAATGGAAGCAGTTGTAGAGATTCCAATACTAATGCACAAGTATCTTCTTCTACAAGCCTAGGACTTGAGAGCTTCTGGGGTCTGTTCTTGGTTGTAGGTGTTTCTTGCTTATTAGCACTCATAATCTTTTTAGCCACATTCCTATATCAGCATAGACATATTTTGTCAAATCATAATCGTTCTGATAGTTCTATTAAAAGACGTATTGGAATGTTACTAAACACCTTCAATGAGAGAGACTTGAGCTCTCACACTTTCAAGAAAAGTGATTCAAGTGTAACTAGTAGTCCTACGTCAGCATCAGCAAGTACACATTGCCCTCCAATTAGTCCATCTAGTTACACAGAATCAAACTTTTTGATCAGTCCAGACCCACATCTTTATTATGCTACTCATCAACACAAAGCCACACAAGAACCTGCCCCCATTACAAACGACACACACACCAAATCTCAAGCCACATAG 2931 0.4217 MVKNQRPTTLVLSLFWWFFGVVATVMGQRNREATTLFQTRVVKVGVVLDLGGGIVGKMGSNSIRMCVNDFYDSHPHYKTRLQLILRDSQRDIVTAAAQVVDLIKNEQVEAVIGPVTTMEAMFVINLGDKAHVPIVTFSATSPSLSSLHTPYFFQIAQKDSTQVEAISAIIQAFRWKEVVPIYVDNSYGEGLIPWLTNSLQKSYIRVPYLSAIDFSATDDAIERELYKLMTMQTRVFVVHMTPLLGSRLFAIAKTIGMMDQGYVWIVTDGMANFFNSLDSSIMESMEGVLGVRPCIPRTKQFLDFRARWKRQFLRDNPTLVDINLNAFGIWAYDATTALAMAVEKLDSTLSGFTNVSKNSSNVTDLENFGVSRNGEKLREALSNVRFKGVGGDFKLVGGGELQASAFEIVNAIGNGERNIGFWMPDKGLIRNMNAKNATTAYSTSKENLGTIIWPGDTYSVPKGWQIPTNGNMLKIGVPVKDCGYTEFVKIIHDPITNSRKVTGFCIDVFNAVVEALPYALPFEFIPFEKSNGEMAGTYDDLITQVYYGKFDAVVGDTTITANRSNFVDFTLPYTESGVTMVVPIRDNRKKNAWAFLKPLTWDLWVTTFCSFVFIGFVVWVLEHRINNHFRGPLPYQIGTSLWFSFSTMVFSHQERVESNCGRFVVIVWVFVVQILVQSYTASLTSLLTVEQLRPANTDVHQLLKNRLNVGYLEGSFVRGMLKDMGFKDEQLKVYNSVEECNDLFTKGSANGGIDAAFDEVPYVMRLLQTYCSKYAMVEPRFKTGGFGFVFPRGSPLVGDISRAILNVMRQGSNMRRIENAWLNGSSCRDSNTNAQVSSSTSLGLESFWGLFLVVGVSCLLALIIFLATFLYQHRHILSNHNRSDSSIKRRIGMLLNTFNERDLSSHTFKKSDSSVTSSPTSASASTHCPPISPSSYTESNFLISPDPHLYYATHQHKATQEPAPITNDTHTKSQAT 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02494 976 Gene3D - 592 721 - -
Aip10g02494 976 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 920 - -
Aip10g02494 976 MobiDBLite consensus disorder prediction 959 976 - -
Aip10g02494 976 SMART GluR_14 472 824 IPR001320 GO:0015276|GO:0016020
Aip10g02494 976 MobiDBLite consensus disorder prediction 909 931 - -
Aip10g02494 976 Gene3D - 723 829 - -
Aip10g02494 976 SUPERFAMILY Periplasmic binding protein-like I 37 455 IPR028082 -
Aip10g02494 976 Gene3D - 373 474 - -
Aip10g02494 976 Pfam Receptor family ligand binding region 61 411 IPR001828 -
Aip10g02494 976 Gene3D - 475 591 - -
Aip10g02494 976 MobiDBLite consensus disorder prediction 955 976 - -
Aip10g02494 976 Gene3D - 160 324 - -
Aip10g02494 976 CDD GluR_Plant 471 822 - -
Aip10g02494 976 CDD PBP1_GABAb_receptor_plant 43 432 IPR044440 -
Aip10g02494 976 Pfam Ligand-gated ion channel 824 857 IPR001320 GO:0015276|GO:0016020
Aip10g02494 976 PANTHER GLUTAMATE RECEPTOR 2.9 42 920 - -
Aip10g02494 976 PIRSF IGluLR_plant 6 940 IPR017103 -
Aip10g02494 976 MobiDBLite consensus disorder prediction 908 931 - -
Aip10g02494 976 Pfam Bacterial extracellular solute-binding proteins, family 3 498 823 IPR001638 -
Aip10g02494 976 SUPERFAMILY Periplasmic binding protein-like II 449 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02494 Aip-Chr10 111075496 111081139 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02494 38 938 Ion Channels AT2G29120 50.055 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02494 K05387 - pop:7465453 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02494 10 111075496 111081139 Aip10g02494 10 111075496 111081139 ECH