Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02484 ATGGGGTATCTCAATTCAGGTGTGTCCTCTTCAAGCCAAGTTCATGCTGCAGATGATGCACCTGCCAGTGGAGGTGGTCTCAGTCATAATGGCAAATTCAGTTATGGATATGCTAGCTGCGCCGGAAAGAGGTCTTCAATGGAAGACTTTTATGAAACAAGAGTTGATGGTGTGGATGGTGAAATCGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGTGGTGTTCGTGCTGCTGAGTATGTCAAGAAAAACCTGTTTAGTAATTTGATCAGTCATCCAAAATTCATATCCGACACTAAATCTGCGATAGCTGATGCGTACAACCATACCGACTCAGAATTTCTGAAATCCGAAAATACTCATAACAGAGATGCTGGTTCAACTGCTTCTACTGCAATTCTAGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGTAATGCCATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGACAAAGGATTGAAGATGCAGGGGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTCGCCGTTTCTCGTGCATTTGGAGATAGGCTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCAAGGTTTGGGTCCGATGTACTCAGTGA 672 0.4509 MGYLNSGVSSSSQVHAADDAPASGGGLSHNGKFSYGYASCAGKRSSMEDFYETRVDGVDGEIVGLFGVFDGHGGVRAAEYVKKNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKSENTHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIKVWVRCTQ 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02484 223 Pfam Protein phosphatase 2C 61 216 IPR001932 -
Aip10g02484 223 PANTHER ALPHABET, ISOFORM E-RELATED 3 216 - -
Aip10g02484 223 MobiDBLite consensus disorder prediction 1 25 - -
Aip10g02484 223 SMART PP2C_4 24 222 IPR001932 -
Aip10g02484 223 CDD PP2Cc 33 217 IPR001932 -
Aip10g02484 223 ProSiteProfiles PPM-type phosphatase domain profile. 34 223 IPR001932 -
Aip10g02484 223 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Aip10g02484 223 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 216 - -
Aip10g02484 223 Gene3D - 26 223 IPR036457 -
Aip10g02484 223 MobiDBLite consensus disorder prediction 1 17 - -
Aip10g02484 223 SUPERFAMILY PP2C-like 28 219 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02484 Aip-Chr10 110884754 110888402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02484 1 216 PP2C-type Phosphatase Gene Family AT4G31750 90.278 4.20e-143 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02484 K17506 - gmx:100797070 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02484 10 110884754 110888402 Aip10g02484 10 110884754 110888402 ECH