Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02466 ATGAGAATAAGCCACTTGATAAAGAAGACTGCAAAAAATGAAGAAAGTGAAGGGAATGTTGAGTGTGGTTTAAGTAAGCAATCAGATGAGTTGGTTGAGTTTGAGATAATGGAAGAGGCATCAGACAAGAAAATTTTTTACTACAAAGATATTTTTGGACTGACGGTAGAGGATATTATTCAGATGGAGTTTTGGACTGAGCAATGTGCGTACAAATTTTACAGGAGATTGGAGAAATACCATGGGTTTAGTGTCCAAAAAGGGGATTACGGCAAGGATGAAAATGAGAATCTGATCCATAGAAGGTTCTTTTGCAAGAGGGCTGGGTTGAGAGATAGGAAGCACTATGTGAGATTAGATAGAAAAAGAATTCATAGGCCAAAGATACGCACAAACTGTGAAGCAAAGTTGTCAATATACTTAGATCGAGGTAGCTCCACTTGGAACGTTAGGAAGGTAATCCTTGAACACAATTATGAGTTGACCTTGAGAGGCATGATTCGCTTAATACCTCACTTTTGTGGCATGTCAGATGCCATGAAGGCACACATCGATAGCATGCATAGTTATGGAATTCCTACATCAAAGATACTCGGATACATATTTGGAATTGCGGGAGATTACTCAATACTAGGCTTTATAAAGAAGGATGCGTATAACCATATAGATAGAAAAAAGCATGATAAGATCACTGATGACAATACGAATGCGACTCTAGCCTATCTATGGAGTGATGCGATTATTGCGGCTGTGCAGAAGATTTTTCCCGATGCAACCCACTGGCTGTGTGTGTGGCATCTTCAGAAGAACATTGCATCAAACAAGAATGAGCAAATTGGTAGAGATTTATTTTCCAAGTGGCTCTATGCCGACATAGGGGTCGATGAATTTGAAATGGCACAATTTAATTCATTGAATAACATGCCTGATATGACAACATGCCTTGATCCTATTGAGAGGGGAGCTGCTGTGATGTATACAAGAGCAACTTTCTCTTTGGTTACAAAGAGGAGGGTTTCGACGACAATGAAAAATGGGTGTTTCTCCGTCCTCTACAAAGGCACTAGGAACCATACTAGTGTGAATGAATATTTGAATGAGTTAGGCACAAATCCAAAACCAAGTCGAGGGAAAAGGCAGCTGATTCTCCATATTGCCATCAAGTTGCCGATTAGGTCATAG 1182 0.3976 MRISHLIKKTAKNEESEGNVECGLSKQSDELVEFEIMEEASDKKIFYYKDIFGLTVEDIIQMEFWTEQCAYKFYRRLEKYHGFSVQKGDYGKDENENLIHRRFFCKRAGLRDRKHYVRLDRKRIHRPKIRTNCEAKLSIYLDRGSSTWNVRKVILEHNYELTLRGMIRLIPHFCGMSDAMKAHIDSMHSYGIPTSKILGYIFGIAGDYSILGFIKKDAYNHIDRKKHDKITDDNTNATLAYLWSDAIIAAVQKIFPDATHWLCVWHLQKNIASNKNEQIGRDLFSKWLYADIGVDEFEMAQFNSLNNMPDMTTCLDPIERGAAVMYTRATFSLVTKRRVSTTMKNGCFSVLYKGTRNHTSVNEYLNELGTNPKPSRGKRQLILHIAIKLPIRS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02466 393 PANTHER OS02G0262500 PROTEIN 246 300 - -
Aip10g02466 393 PANTHER OS02G0262500 PROTEIN 58 209 - -
Aip10g02466 393 Pfam FAR1 DNA-binding domain 72 161 IPR004330 -
Aip10g02466 393 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 58 209 IPR031052 GO:0006355
Aip10g02466 393 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 246 300 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02466 Aip-Chr10 110632489 110634979 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02466 FAR1 3.5e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02466 - - aip:107620909 501.13