Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02445 ATGGAAACAACATGCGTGGATACGTCTCTCACCCTCAACCTTGTTTCCCTTCACAAAACGGATGTTGCGCCGGAGGTTTTGGTTGAAGAATTGCATCGGCTAAGCTGTGAGAACAAGAAGCTAACGGAGACATTGAAGCAAGTATGTGAGAACTATATTGCCTTGAAAACCAAGCTCAGCCAACTGAGCAGCAATAACATGGTGAGTTCCGAGAAAGAAGCCGCGGTGTCAAGGACGCCAACACGGAAGAGAAAGGCGGAGAGTGAGAGCTGCATGAGTACCTATAGTGATAAGTGCAACACCCCAACTAGTACGGATGAAGAAACACTCAAAAGAGCTAAGCATGAAGGTTCGCCAAAGGTTTCCAAGATTGTTGTACGAACTGAAGCATCTGATACTACCAGCTTATATGTGAGGGATGGATATCAATGGAGAAAATATGGGCAGAAAGTGACCAGAGATAACCCCTCTCCTAGGGCTTACTTCAGGTGCTCCAATGCCCCAAACTGCCCCGTCAAGAAGAAGGTGCAAAGGAGTGCAGAAGATCGAAGAATGTTGGTGGCAACATACGAAGGAGAGCACAACCATGTGCAACCGCAAGATTCTTATTATTCATCAAGCCTACAAAGTGATGATCATTATCAAAGCCCTACTAGAGTTGACTTGGTCAATAAGTCAGAATTATTAGAATCGGTTGGCAATAACAATGATGGAGGAAAGTCTTCTTGTGTGCGGCTGCAGCCCCAGCTGTTAGCTCAACAAATGGCCACTTCTTTGACTAAGGATCCCAATTTCACCGCCGCACTTGCAACCGCCATTACAGGAAGAATTCTATCTTCACACTTCTCCTAA 852 0.4566 METTCVDTSLTLNLVSLHKTDVAPEVLVEELHRLSCENKKLTETLKQVCENYIALKTKLSQLSSNNMVSSEKEAAVSRTPTRKRKAESESCMSTYSDKCNTPTSTDEETLKRAKHEGSPKVSKIVVRTEASDTTSLYVRDGYQWRKYGQKVTRDNPSPRAYFRCSNAPNCPVKKKVQRSAEDRRMLVATYEGEHNHVQPQDSYYSSSLQSDDHYQSPTRVDLVNKSELLESVGNNNDGGKSSCVRLQPQLLAQQMATSLTKDPNFTAALATAITGRILSSHFS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02445 283 ProSiteProfiles WRKY domain profile. 133 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g02445 283 MobiDBLite consensus disorder prediction 195 216 - -
Aip10g02445 283 Coils Coil 31 51 - -
Aip10g02445 283 MobiDBLite consensus disorder prediction 76 91 - -
Aip10g02445 283 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 281 IPR044810 GO:0003700
Aip10g02445 283 SUPERFAMILY WRKY DNA-binding domain 135 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g02445 283 Pfam WRKY DNA -binding domain 140 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g02445 283 Gene3D WRKY domain 120 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g02445 283 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 281 - -
Aip10g02445 283 MobiDBLite consensus disorder prediction 191 216 - -
Aip10g02445 283 MobiDBLite consensus disorder prediction 64 115 - -
Aip10g02445 283 SMART WRKY_cls 138 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02445 Aip-Chr10 110186707 110188925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02445 3 277 WRKY Transcription Factor Family AT1G80840 43.051 3.87e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip10g02445 WRKY 5.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02445 - - gmx:100127373 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02445 10 110186707 110188925 Aip10g02445 10 110186707 110188925 ECH
Aip06g03451 06 131552383 131584362 Aip10g02445 10 110186707 110188925 PCT