Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02434 AATGAGGCGGAGGCGAAGAAGAAGGAAGAGGCGCTGGTGGAGCTGAAGCAAGTGGTGAAGGACCTGCAGCAGGGAGAGGACTTGGCGAAGCGCCGCATGGCGGCGACGACGGTGAGGTCGCTTGCGAAGGAACGATCGGAAGTTAGGGGAACGCTCGCTATGCTTGGAGCTATTCCTCCGCTCGTCGGAATGCTCGATTCCGAAGACGTTCATTCTCAGATTGCTTCGCTCTATGCGTTGCTCAATCTCGGGATCGGCAACGATGCAAACAAAGCAGCCATCGTTAAAGTTGGTGCTGTTCACAAGATGTTGAAGTTAATTGAATCACCGGATGCTACTAATTCATCAGTTTCTGAAGCAATTGTTGCTAATTTCCTTGGATTGAGTGCTTTGGATTCAAATAAACCAATAATTGGATCCTCTGGTGCAATTCCATTCCTAGTTAGAACCCTTCAAGATTTGGATTACGAATGTAGCCACCAAGCCAAGCAAGATGCTCTTCGAGCTCTGTACAATCTATCAATCTTTCCAACCAACAGTTCATTCATTTTGGAAACTGAGTTGGTCCCCTTTTTGGTTAGTTCAATTGGAGACATGGAAGTGAGTGAGAGAGTGCTTGTGATTCTAAGCAATCTGGTTCCAACTCCAGAGGGCAGGAAAGCTATCAGTGCTGTAAAGGATTCGATCTTCATTCTGGTGGATGTGTTGAATTGGACGGATTCGCCGGAGTGCCAAGAGAAGGCGTCATACATTTTGATGATTATGGCACACAAATCCTACAGCGACAGGCAGGTCATGATTGAGGCTGGGATTGGATCATCACTGCTTGAATTGACCCTTCTTGGTTCTACATTGGCACAGAAAAGGGCCTCAAGGATCTTGGAATGTTTGAGGACGGACAAAGGGAAACAAGTTTCTAGAAGCTATGGTCGAGGAAGCTTGGGGGCCGATATCTCTGCGCCTATTTTCAGCGCGTCGCCGTCTTTTACGAAGGCTTCGGGTGGAGGAGGTAAAGGCTATTTGGAGGAAGAGGAGGAGGAGGAAGATACGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTAGTCCAACAGAGTTTGCAAAACAACATGAGGAAAATTGTCAAGAGGGCCAACTTGCGTCAAGATTTTGTTCCATCCCAGCATTTGGCTTCACTTACTTCAAGTTCAACTTCTAAGAGCCTGCCATTTTAA 1212 0.4703 NEAEAKKKEEALVELKQVVKDLQQGEDLAKRRMAATTVRSLAKERSEVRGTLAMLGAIPPLVGMLDSEDVHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPDATNSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQDLDYECSHQAKQDALRALYNLSIFPTNSSFILETELVPFLVSSIGDMEVSERVLVILSNLVPTPEGRKAISAVKDSIFILVDVLNWTDSPECQEKASYILMIMAHKSYSDRQVMIEAGIGSSLLELTLLGSTLAQKRASRILECLRTDKGKQVSRSYGRGSLGADISAPIFSASPSFTKASGGGGKGYLEEEEEEEDTMSEEKKAVKQLVQQSLQNNMRKIVKRANLRQDFVPSQHLASLTSSSTSKSLPF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02434 403 Pfam Armadillo/beta-catenin-like repeat 47 83 IPR000225 GO:0005515
Aip10g02434 403 Gene3D - 2 155 IPR011989 -
Aip10g02434 403 Coils Coil 5 25 - -
Aip10g02434 403 SMART arm_5 87 130 IPR000225 GO:0005515
Aip10g02434 403 SMART arm_5 131 175 IPR000225 GO:0005515
Aip10g02434 403 SMART arm_5 45 85 IPR000225 GO:0005515
Aip10g02434 403 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 2 403 - -
Aip10g02434 403 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 403 - -
Aip10g02434 403 Coils Coil 341 364 - -
Aip10g02434 403 Gene3D - 156 309 IPR011989 -
Aip10g02434 403 SUPERFAMILY ARM repeat 14 295 IPR016024 -
Aip10g02434 403 MobiDBLite consensus disorder prediction 330 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02434 Aip-Chr10 109813710 109815158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02434 22 311 U-box Gene Family AT1G67530 29.966 3.77e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02434 - - zju:107422474 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02434 10 109813710 109815158 Aip10g02434 10 109813710 109815158 ECH
Aip06g03435 06 131308276 131312029 Aip10g02434 10 109813710 109815158 PCT