Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02430 ATGGAATTTGACACAGTACTAGAAGCTAAAGACTTCTGGAAAAGTTATGGTGGAATGATGGGTTTTGATGTTCGACAATTGTATGCAAATAAATGCAAGCTTGATAATTCTGTAAGTAGTTTTAGACTTATTTGTGCAAAGGAAGGCCAACGAAGACCAGATAAACGGGATCATTTAACAAAGCAACCTCTCGCCGAGACTAGAACAAGTTGTCAAGTAAGAATGTCACTCAAGTTTGCTCGAGATATAAAAAAATATGTGATTTGTGACCTTGAGTTAAATCACAATCATATTTTGCAAATTCCGGAAACCAGTCATATGATGCCATCACAAAGAAAGATTTCAGAAGTACAAGCATTGCAAATAGATTTGGCAGATGAAGCTGGCATAAGACCAAAGGAAACTCATGAACTAACAAGTTTACAAGCTGGTGGTAAAGATGTCCTTGGATATACCAAACAAGACCAAAAGAACTATCTTCGAAGCAAACGAAAGCAAGACTTGGCCTATGGCGAAGCAGGTAGTTTATTAAAGTATTCTCATCGACAACTACTTAATAATCCCTCATTTCAATATGCTATACAGTTAGATAACGAAGAGAAAATAACAAATATTTTTTGGGCTGATGCAAGAATGGTTATTGATTATGCTATCTTTGGTGATGTAATCACATTTGACACTACATACTGCACAAACAAAGAAATTAGACCATTGGGTGTTTTTTGTGGATTCAATCACCATCGAGAAATAGTAATATTTGGCGCTGCTCTTTTGTATGACGAATCAAAAGAATCTTTTATGTGGTTATTTGAATCATTTTTGGAAGCTCACATGCAAAAAAAGCCTAAAACTATTTTCACTGATCAAGATCCTGCAACGGCAAGTGCTTTGGTAGAAAAAATGCCTGAAACATATGATGGATTATGTGTCTGGCATATTATGCAAAATGCTATTCGACATTTAGGGAATAAGTTGAAAGATGGTTCTTTTATCTTGAGAGATTTCAAAGCTTGTATGTATAATTCTGAAGATCAGTTTCAATTTCAAGAGTCATGGGATGCATTGCTTCAAAGATACAAAGTGGAAGACAATTCTTGGTTGAAGAGTATTTATAAAGTGAAGGAAAAATGGGCTCATTGCTATATGAAGAAGGTGTGTACTATTGGAATGCGAAGCACTCAACTTAGTGAAAGTTTTAACAGTGATTTGAAAGATTTTATGCGGTCAAGTTTAGACATAATACATTTTCTCAAACAGTTTGAGCGAGTTGTTGGTGGCAAGCGATACAAAGAGCTACAAGCTGAATACAATGCAAGACAAAAGCTTCCTAGACTTAAGATGATTCACTCGCCGTTATTGAAGCATGCTGCACAGCAAATTCCGGCTCAATACATTATGAAAAGATGGACTAGAGAAGCAAGAGAGATGATTGTTCATGACTCAGATGGAAAAGTTGTTCAAAGTGATACTAGAGCAGATGCTACAGCACGGTATAAGAATATATGTTTCAAAGCAATCAAATTAGCTGCTCGATCATCAGATTTTGAAGTAACATCTAATTTTGTTGAGCAAGTTATAGAAGAGGCATATAAGAAGGTAGATTCTTTTTGTAGACACAATCAAGATGATGATGTTTCAAATATTTTGAATGCAAAAGAAATCGTTAATAGCTGTTCAGATGGAGATGCGTTAGAAAGATTACTTGAAAATGTGAAAGGGTTGAAAAAAAGGAAGGACAAAAAGGTAGAAAAAGACTCCAGAGTTGGGTTGAAAAACAATCAAACAAGAGAATGGCGTCAACAAAAAAAAGTTCCACCCAAAATTGTCAGGCTGAAATTTTCACTTCAAATATTGAAAATCAAGCTATTTTGCCACTTCAATCATGGAATCAAGTTACAACACTAA 1905 0.3507 MEFDTVLEAKDFWKSYGGMMGFDVRQLYANKCKLDNSVSSFRLICAKEGQRRPDKRDHLTKQPLAETRTSCQVRMSLKFARDIKKYVICDLELNHNHILQIPETSHMMPSQRKISEVQALQIDLADEAGIRPKETHELTSLQAGGKDVLGYTKQDQKNYLRSKRKQDLAYGEAGSLLKYSHRQLLNNPSFQYAIQLDNEEKITNIFWADARMVIDYAIFGDVITFDTTYCTNKEIRPLGVFCGFNHHREIVIFGAALLYDESKESFMWLFESFLEAHMQKKPKTIFTDQDPATASALVEKMPETYDGLCVWHIMQNAIRHLGNKLKDGSFILRDFKACMYNSEDQFQFQESWDALLQRYKVEDNSWLKSIYKVKEKWAHCYMKKVCTIGMRSTQLSESFNSDLKDFMRSSLDIIHFLKQFERVVGGKRYKELQAEYNARQKLPRLKMIHSPLLKHAAQQIPAQYIMKRWTREAREMIVHDSDGKVVQSDTRADATARYKNICFKAIKLAARSSDFEVTSNFVEQVIEEAYKKVDSFCRHNQDDDVSNILNAKEIVNSCSDGDALERLLENVKGLKKRKDKKVEKDSRVGLKNNQTREWRQQKKVPPKIVRLKFSLQILKIKLFCHFNHGIKLQH 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02430 634 Coils Coil 564 584 - -
Aip10g02430 634 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 457 IPR031052 GO:0006355
Aip10g02430 634 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 458 542 IPR031052 GO:0006355
Aip10g02430 634 Pfam FAR1 DNA-binding domain 11 100 IPR004330 -
Aip10g02430 634 PANTHER OS03G0181600 PROTEIN 1 457 - -
Aip10g02430 634 PANTHER OS03G0181600 PROTEIN 458 542 - -
Aip10g02430 634 Pfam MULE transposase domain 222 316 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02430 Aip-Chr10 109489005 109491262 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02430 MULE 2.7e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02430 - - aip:107620925 939.873