Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02423 ATGGAGCCGTTGGATAGCCATTTTTTTGGAATAGACTCCGATGAGGAGTTCCCAAGAGGAGACAATATAGATTTTCTAGAAGACGATTTGGAGGCTGATGAAGATAGACCTCAAGATAAGAGAATAGCAGAGCTGTCACGAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGCTGTTTATCGATTCTACAAGACTTATGCAATGATGCACAGTTTCACTATGAGGTTGGATGAAGTCAGACACGATAGCGATGGTTGCATAATTATGCGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGATGAAAGAATCCAGGAACACCGACCCCTAACTCGAAGTTGTTGCCGGGCAAGAATTTGTGCAAGACTCGATAGAAAAATTTATAAATGGAAGGTTGTTTCGTTCTATGAAGAGCACTCTCATGGATTAGTTGATCCACTCGACGTTAGCATGATGCCTAAGTATCGCACATTTAGTGTCTCGGATAAAACTCAGGCGAAGAATTTGCACGACATAGGCATCAGGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCAAACTTGTCATTCAACCAAAAAGATATGTACAACCTCATTACTCAACATAGGAAGAAAAAGGTGAAGGGTGGTGATGCAAATGTTGTAATAAGCTACCTGAGAGGTAAAGCTGGGAATGATTCTTATTTCTTTGGCAAATCGATTGAAAAATTTGTTTTGGGCTGA 762 0.4121 MEPLDSHFFGIDSDEEFPRGDNIDFLEDDLEADEDRPQDKRIAELSREDIMQLQFTDEEAVYRFYKTYAMMHSFTMRLDEVRHDSDGCIIMRQIVCNRAGSRKEEVEKDERIQEHRPLTRSCCRARICARLDRKIYKWKVVSFYEEHSHGLVDPLDVSMMPKYRTFSVSDKTQAKNLHDIGIRTCHILGYLAAQKGGYANLSFNQKDMYNLITQHRKKKVKGGDANVVISYLRGKAGNDSYFFGKSIEKFVLG 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02423 253 Pfam FAR1 DNA-binding domain 63 152 IPR004330 -
Aip10g02423 253 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 34 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02423 Aip-Chr10 109252204 109252965 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02423 FAR1 3.8e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02423 - - aip:107620373 419.468