Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02417 ATGTCTCCTCCGAATGTAACTGATTCTGATTCTTTCCAAGTCTGGGATGTTTTAAGCAATGAAGAGGTGGTTGAGATAGTATCTTCGGCACCAACACGGTCATCAGCTGCAAGGATTCTGGTAGATGCTGCAGCCCGGGAGTGGAAACTTAAGTATCCAACTTCAAAGATGGACGACTGCGCCGTGGTCTGCCTATTTTTGGATGGTAAAATGGACACAGAATTTGACTATGACGAACAAGGCTTCTCTTCTGCAATCCTTCAGAGCAATCATTTTGGAAACCTGGTCGAGTCATGA 297 0.4512 MSPPNVTDSDSFQVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDTEFDYDEQGFSSAILQSNHFGNLVES 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02417 98 SUPERFAMILY PP2C-like 14 69 IPR036457 -
Aip10g02417 98 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 13 97 - -
Aip10g02417 98 Gene3D - 5 79 IPR036457 -
Aip10g02417 98 PANTHER ALPHABET, ISOFORM E-RELATED 13 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02417 Aip-Chr10 109105036 109105332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02417 6 85 PP2C-type Phosphatase Gene Family AT1G03590 70.115 3.11e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02417 - - adu:107477895 164.081