Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02411 ATGTGTTGCAATTCCTCAAAAGACACACAACAAACATTGAAAATGAACCCTGTTCCTATGATTCTCTCCATGTTCCTGATCCTCCTTCTTCACCGTGCAGTTGCACAAACACAACACCACCCTCCTTTTCATTCTCCTGCACCCGCACCTGCACCTGCACCTGTTCCTGTTTCTCAACCCATTGCTCCACTTTTCACCTCCAATCCCATCCCTGCAGCTCTCTCTCCTGGATTTCAGGTTGGGGAACAACAACAGCACCGAAAAAGTTCACACAACAAAACGGTGGTTATATCTGTGGCCGTAGCCACCGGTGCAGTTGGTGCAGTTATTCTCACTTTGCTATGCTTCTGGATTTGCCATACCAAGCGTCCCTCAAAATCAAACAAGAAGAATCAAAGTCTTCACATCTCAGATACAGTGGAGAAAGGGCTCATAGGAATGAAGACGATTGGTATGAAAGGTTGTGCTCCAATCATTGATTATAAACAAATAGAGAAAAGCACGAATAATTTTGACGAAAGTAACATCTTGGGTGAAGGAGGTTTTGGATGTGTTTACAAGGCTCGTTTGGATGATAATCTTGTTGTTGCTGTTAAGAAGCTACACTGTCAAACTCAAAATGCTGAGAGAGAATTCGAGAATGAGGTCCAATTGTTGAGCAAAATTCAGCATCCCAATATAATTCCTCTGCTGGCTTGTAGCATTAATGGGGACACCAGGTTCATCGTTTATCAGTTGATGCAAAATGGATCCTTAGAAGCTCACTTACATGGACCTACTAGAGGGTCTGCATTGACTTGGAACATGAGGATGAAGATTGCTCTTGACACGGCAAGAGGATTAGAATATCTGCATGAGCATTGTCACCCTCCTGTCATCCATAGAGATATGAAATCTTCCAATATTCTTTTGGATGCAAACTTCAACGCTAAGCTATCTGATTTTGGGCTTGCCATAACTGATGGGTCCCAAAGCAAGAAGAACATTAAGCTTTCAGGCACATTGGGGTACGTAGCCCCAGAGTACCTTTTAGATGGGAAATTGACAGATAAAAGCGATGTGTATGCATTTGGGGTTGTACTTCTTGAACTTCTGTTAGGAAGGAAGCCTGTGGAGAAACTGGCACCAGCTCAATGCCAATCTATTGTCACATGGGCGATGCCGGCACTGACAGACAGATCCAAACTTAGGAACATTGTGGATCCAGTGATCAAAGATACAATGGATGTCAAGCACTTATATCAGGTTGCTGCTGTTGCTGTTCTCTGTGTTCAGCCTGAGCCAAGTTACCGTCCTCTAATCACTGATGTTCTTCATTCACTTGTCCCTCTTGTTCCCATTCATCTTGGAGGAACACTCAGATCTCATTGA 1371 0.4362 MCCNSSKDTQQTLKMNPVPMILSMFLILLLHRAVAQTQHHPPFHSPAPAPAPAPVPVSQPIAPLFTSNPIPAALSPGFQVGEQQQHRKSSHNKTVVISVAVATGAVGAVILTLLCFWICHTKRPSKSNKKNQSLHISDTVEKGLIGMKTIGMKGCAPIIDYKQIEKSTNNFDESNILGEGGFGCVYKARLDDNLVVAVKKLHCQTQNAEREFENEVQLLSKIQHPNIIPLLACSINGDTRFIVYQLMQNGSLEAHLHGPTRGSALTWNMRMKIALDTARGLEYLHEHCHPPVIHRDMKSSNILLDANFNAKLSDFGLAITDGSQSKKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPAQCQSIVTWAMPALTDRSKLRNIVDPVIKDTMDVKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLVPLVPIHLGGTLRSH 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02411 456 SUPERFAMILY Protein kinase-like (PK-like) 155 441 IPR011009 -
Aip10g02411 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Aip10g02411 456 PANTHER BNAA04G14780D PROTEIN 70 455 - -
Aip10g02411 456 ProSitePatterns Protein kinases ATP-binding region signature. 177 200 IPR017441 GO:0005524
Aip10g02411 456 Gene3D Phosphorylase Kinase; domain 1 137 245 - -
Aip10g02411 456 ProSiteProfiles Protein kinase domain profile. 171 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02411 456 PANTHER OS01G0750732 PROTEIN 70 455 - -
Aip10g02411 456 SMART serkin_6 171 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02411 456 Pfam Protein kinase domain 172 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02411 456 Gene3D Transferase(Phosphotransferase) domain 1 247 446 - -
Aip10g02411 456 CDD STKc_IRAK 177 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02411 Aip-Chr10 108830744 108834401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02411 128 445 Receptor kinase-like Gene Family AT3G58690 45.988 1.71e-96 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Aip10g02411 Pkinase 7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02411 - - ahf:112784689 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02411 10 108830744 108834401 Aip10g02411 10 108830744 108834401 ECH
Aip06g03418 06 131100928 131107494 Aip10g02411 10 108830744 108834401 PCT