Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02408 ATGCTCGTTGTCCGCCGTGCTTGTCAGTCGAAGTTCGATGATTGTCAAAAATATTATTGTGCGAGTGATGACGACGAGGGCTTTGAGTGCCAAAAGGGTCCCAAAGGCTGGGAAAATGGGATAGGGGATGCTGACGATGGTAAAGGGTTTGGTGGTGCAACTGATGCGGCAGACGGTGGTCTTAGCTGGCCAGTCATCGTGAAGGACTTCTTGGGCAGAGAGTTTGCTACGGAGGAAGATGCTTATGCTGCCTACAAGGAGTTTGCTAGATTTAGGGGTTTTGGAGTTCGAAAAGGAGATGCTGTGCGTGTTAAGGGGGTTTTGATTAGGAGAGACTTTTTCTGCCATCGACAAGGTATAAAACATCCTAACCACTCTGAACAAGTATGGGAGGAGAGGTTGGAGAGTCGAACGGATTGCAAGGCAAAGTTGAAGATTTACCATGATGTGCAACATAACGTGTGGAAGGTCAGCACCATCATTGACGAACACAACCACGAGCTTGCTCTAACCATATTTACACATCTCCTTCCTAGTCATCGGAAGATGAGTGACGGCGACAAGACCCAGGTTGATAGTATGAAGTAG 588 0.4762 MLVVRRACQSKFDDCQKYYCASDDDEGFECQKGPKGWENGIGDADDGKGFGGATDAADGGLSWPVIVKDFLGREFATEEDAYAAYKEFARFRGFGVRKGDAVRVKGVLIRRDFFCHRQGIKHPNHSEQVWEERLESRTDCKAKLKIYHDVQHNVWKVSTIIDEHNHELALTIFTHLLPSHRKMSDGDKTQVDSMK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02408 195 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 68 168 - -
Aip10g02408 195 Pfam FAR1 DNA-binding domain 85 169 IPR004330 -
Aip10g02408 195 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 68 168 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02408 Aip-Chr10 108719115 108721361 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02408 FAR1 4e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02408 - - aip:107607194 244.588