Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02397 ATGAAGAAGCAAGGGTGTGAGGTTGAAGCAATAGGCATCAACTACAAGATTTGCACAGGCACAACAGAGCAAACTTTCAAGATCTTCAGAAAACCTCCACAACTGAATAATGAAGAACATGGAGAGGCACCAGAACCAGCAGAGGAAGCAAGAACTAATGATCACAGATCATTCTGCAGCAGAGTTAGGCATATTCTCTGGGATGTGAACTGCGTGGCGAAGCCGTCGGAAGTTCTGGCAGTTGTTGGTCCAAGTGGGGCTGGAAAATCATCCCTCCTTGAGATTCTTGCCGGCAAAGTTTGTCCGACAAAAGGGTCTATCTTGGTGAACAAGAAAACTGTAGATAAAGCACAGATCAGGAAGATTTCGGGGTATGTAACACAAAAAGATATCTTATTTCCATTACTTACGGTTGAAGAAACATTGATGTTTAGTGCAAAGTTAAGGCTGAATCTTCCTAAGCAACAACTATGCTCCAGAGTGAAGTCACTGATTCAGGAACTTGGTCTTGGCCATGTTGCTAGGACTAGAGTCGGAGATGAAAAGGTTCGGGGAATATCCGGTGGCGAGAAGCGCCGCGTTTCAATTGCCATAGAAGTAGTACATGATCCAAAAGTGCTGATTCTGGATGAACCAACTTCAGGCCTCGACAGTACTAGTGCAATGCAGATAATTGGTATGCTAAAAGTCATGTCCGAATCGAGGGGACGAACTATAATCTTCAGTATCCATCAACCTGGGTTCAGAATAGTGAAAATGTTCAATTCAATATTGTTGTTAGCCAATGGTTCTGTGTTGCACCATGGCACTGTGGATTTGCTAGGTGTGAATCTAAGGTTAATGGGTTTAGAGCTTCCTCTTCATGTTAACGTAGTTGAATTCGCCATTGAGTCTATTGATACCATTCAGCAGCAACAAAAATGTGAAGAAGATCAGCAGCAAGTGCCACAAAGATTGCGAGGAATTGCACCACGGAAGAAAGGCAATGATCGAGGCGAGAGTAGAAGTGGTAGGTTTACTCTGCAGCAGCTCTTTCAACAATCCAAGGTAACTGATGTTGGAATGATCAATGAGGAAATGGATTTCACTTGTGAGTTTGCTAATTCTAGATTGAGAGAAACTATTATTCTCACTCATAGGTTTGCCAAAATCATTCTTCGCACGAAGGAGCTCTTCGCATGTAGGACAATTCAGATGCTGATTTCTGGGCTGGTTTTAGGCTCTGTCTTTTGTCATCTCAAGGATGGTCTAGAAGGAGCACAAGAAAGGGTTGGTCTATTTGCTTTCATACTAACATTTTTGTTATCATGCACCACAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAGGGAAACCTCTAGTGGAAGCTATAGAGTATCATCCTATGCTATTGCCAATGCCTTAGTTTTCTTGCCATTTCTACTCATTCTTGCCATTTTATTCACAATGCCCTTATATTGGCTCGTTGGCCTAAACAAGAACTTCGCAGCGTTCTTGAACTTCTTGTTGATAATTTGGCTAATTCTTTACACGGCGACTTCCGTGGTGGTGTGTTTCAGTGCTCTGGTGCCAAACTTCATTGTTGGGAATGCAGTGATTTCTGGTGTCATTGGTTCATTCTTTTTGTTCTCTGGTTACTTCATATCAAAAAATGAGATTCCTAAGTACTGGATTTTCATGCATTATGTGTCTCTATACAAGTATCCTTTTGAAGGCTTTCTAATAAATGAGTTCTCCAACTCAAAGAAATGCTTGGAATACATGTTTGGGGCATGTTTGGTAAAGGGAGAAGACGTGCTTAAAGAAAAAGGGTATGGCGGGGAAAATAGTAGATGGAAGAATCTTGGAATGATATTGTGCTTTATCTTAATCTACAGAATAGAAGTTCTCTATGTTGGTTGCGAGGAAGCCAATAGTACCAACAAACTGAAGGTTTTGGAGGATCCTGATCCTGAGCCATACCCGAATTGCAAGAGAAAGAAAAGGTTTAATGTCCGAAGCGTAGGATGCCGGAAAGCATTTGACATAAGAAATTTCATATTCTATTCAAGGGCAGCCTCTATTGGCATTTCCATTTCACAATTCAAGTTCAGTTCAGACTCACTTTCTTCCTCACACATCTCTTCTTCATCAAATTCTGGCATGTAA 2160 0.4134 MKKQGCEVEAIGINYKICTGTTEQTFKIFRKPPQLNNEEHGEAPEPAEEARTNDHRSFCSRVRHILWDVNCVAKPSEVLAVVGPSGAGKSSLLEILAGKVCPTKGSILVNKKTVDKAQIRKISGYVTQKDILFPLLTVEETLMFSAKLRLNLPKQQLCSRVKSLIQELGLGHVARTRVGDEKVRGISGGEKRRVSIAIEVVHDPKVLILDEPTSGLDSTSAMQIIGMLKVMSESRGRTIIFSIHQPGFRIVKMFNSILLLANGSVLHHGTVDLLGVNLRLMGLELPLHVNVVEFAIESIDTIQQQQKCEEDQQQVPQRLRGIAPRKKGNDRGESRSGRFTLQQLFQQSKVTDVGMINEEMDFTCEFANSRLRETIILTHRFAKIILRTKELFACRTIQMLISGLVLGSVFCHLKDGLEGAQERVGLFAFILTFLLSCTTEALPIFLQEREILMRETSSGSYRVSSYAIANALVFLPFLLILAILFTMPLYWLVGLNKNFAAFLNFLLIIWLILYTATSVVVCFSALVPNFIVGNAVISGVIGSFFLFSGYFISKNEIPKYWIFMHYVSLYKYPFEGFLINEFSNSKKCLEYMFGACLVKGEDVLKEKGYGGENSRWKNLGMILCFILIYRIEVLYVGCEEANSTNKLKVLEDPDPEPYPNCKRKKRFNVRSVGCRKAFDIRNFIFYSRAASIGISISQFKFSSDSLSSSHISSSSNSGM 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02397 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 273 IPR027417 -
Aip10g02397 719 MobiDBLite consensus disorder prediction 33 52 - -
Aip10g02397 719 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 638 - -
Aip10g02397 719 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 638 - -
Aip10g02397 719 Pfam ABC-2 type transporter 374 582 IPR013525 GO:0016020|GO:0140359
Aip10g02397 719 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 50 287 IPR003439 GO:0005524
Aip10g02397 719 MobiDBLite consensus disorder prediction 313 335 - -
Aip10g02397 719 Pfam ABC-2 type transporter 244 318 IPR043926 GO:0140359
Aip10g02397 719 Pfam ABC transporter 68 214 IPR003439 GO:0005524
Aip10g02397 719 Gene3D - 54 322 IPR027417 -
Aip10g02397 719 SMART AAA_5 75 264 IPR003593 -
Aip10g02397 719 MobiDBLite consensus disorder prediction 32 52 - -
Aip10g02397 719 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02397 Aip-Chr10 108155621 108160607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02397 71 298 Calmodulin-binding Proteins AT2G36910 27.869 9.32e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02397 K05681 - gmx:121172640 929.087