Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02372 ATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCTTGCCCACAGAAAAATGTCAGAGGCAGATAGTATGCAAATGATGAACATGCTAAAGTCAGGGATTAGCACCTCACATATTTTTAGTCTTCTAGCTAGTCAAGCAGGCGGGTACGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGACTGCTCGGCAAAGGCGTCAAATTTCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAAGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCACGATTCAAGAGGTTTGTTACGTAATTTGTTCTGGTCTGATGGGATTAGCCAACTAGACTACCGACTCTTCGGGGATGTTATTGCTTTTGATGCTACGTACAAGAAGAACAAGTATAGTTGTCCATTAGTAATATTCAGCGGGGTTAACTACCACAACCAAACAATTGTTTTTGCTGCTGCGTTAATTGCAGACGAAACTACTGATACATATATTTGGCTCCTGCGTTAG 645 0.4109 MEKRKKEPRLETRTGCEARMDVKFVPESGRWHIFYFSDEHNHDLLDTQFSAMLLAHRKMSEADSMQMMNMLKSGISTSHIFSLLASQAGGYEFVGYGPRDMYNETARQRRQISGDAARVLKKLEDMRLKDPQLYFKACHDSRGLLRNLFWSDGISQLDYRLFGDVIAFDATYKKNKYSCPLVIFSGVNYHNQTIVFAAALIADETTDTYIWLLR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02372 214 PANTHER OS02G0262500 PROTEIN 4 214 - -
Aip10g02372 214 Pfam FAR1 DNA-binding domain 3 45 IPR004330 -
Aip10g02372 214 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 214 IPR031052 GO:0006355
Aip10g02372 214 Pfam MULE transposase domain 165 214 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02372 Aip-Chr10 107442907 107443551 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02372 MULE 1.3e-11 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02372 - - aip:107620962 438.728