Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02357 ATGGCCGCAATGAAGTCAATTCCAGGGTACCGGTTTCATCCAACCGATGTTGAGCTGGTTCAGTACTTTCTGAAAAGGAAGGTGATGGGGAAGAGATTCCCTTGTGATGTGATTGCTGAACTTGATATATACAAATATCCGCCGTGGGATCTACCAGATCATTCTCTGCTTAAAACTGGAGATTTAGAATGGTACTTCTTTTGCCCTCGAGGGAAGAAGTATTCGAGCGGAGGGAGGATGAATAGGGCCACAGAATGTGGGTACTGGAAGACTACTGGCAAGGATAGATCCGTCGAGAACAAGAAGCTTGTTGTGGGCATGATAAAGACTCTGGTGTTTCACAATGGTAAAGCACCCAAGGGAGATCGAACTGATTGGGTTTTGCATGAATACCGACTTCAAGATAAGGACCTTGCTGATAAGGGTGTTCAACAGGATTCTTATGTGATATGTAAAGTGTTCCAAAAGGATGGTCCTGGTCCTAGGAATGGTGCACAATACGGAAGGCCATTTAATGAGGAAGACTGGGATAAAGAGGATGAAATTGACTGTGTAGAATCTGCACCTGTTGCTGCTCTACCTGCTGCAGTTCCTATACAACCCGCTTCATGTCATAGCTCTGTTGTGAATAACGTGAATCTCTCTGTGAGTGAATGCTATGGGTTGACCTCTGTTTCGTGTTTAACAGGGCCAATGCCTTCTTGCTCAGCACATCCTTCAGCTCCAAGTAATCAAGTTGATGGTGATATTACACCAGTGCCTGGTTCCGCCATAGAAGATAACATAATGGCTCCTACTGAGAACACCACAACTGAAAAGGTTGACAATCCTCCTGACATAAACAATGCTGAAGGAACACCTTGCTTTGATCCCAATGAGATTTTTGGGGGTCTGGGTGACCTTGATGGTTTGTTCGAAATGGGTGGAATTGGACATGGTTTTTCCTGCGGCCAAAATGGTGGATATACTGTGAATGAAATGCTTTCTGCGAGTGATGGGTTGCGTTTCCCTGATCCCCTGGACTACTTGGAGTTGGGTGACCTCGACACCCCATTGTTATGGGAGACTAATGAACAAGGAAATTGGAGCCAGGACAATAAATGA 1104 0.452 MAAMKSIPGYRFHPTDVELVQYFLKRKVMGKRFPCDVIAELDIYKYPPWDLPDHSLLKTGDLEWYFFCPRGKKYSSGGRMNRATECGYWKTTGKDRSVENKKLVVGMIKTLVFHNGKAPKGDRTDWVLHEYRLQDKDLADKGVQQDSYVICKVFQKDGPGPRNGAQYGRPFNEEDWDKEDEIDCVESAPVAALPAAVPIQPASCHSSVVNNVNLSVSECYGLTSVSCLTGPMPSCSAHPSAPSNQVDGDITPVPGSAIEDNIMAPTENTTTEKVDNPPDINNAEGTPCFDPNEIFGGLGDLDGLFEMGGIGHGFSCGQNGGYTVNEMLSASDGLRFPDPLDYLELGDLDTPLLWETNEQGNWSQDNK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02357 367 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 240 - -
Aip10g02357 367 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Aip10g02357 367 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Aip10g02357 367 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Aip10g02357 367 PANTHER PLANT NAC DOMAIN PROTEIN 1 240 - -
Aip10g02357 367 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02357 Aip-Chr10 106825867 106827897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02357 1 359 NAC Transcription Factor Family AT5G09330 42.162 1.46e-91 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip10g02357 NAM 3.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02357 - - adu:107470479 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02357 10 106825867 106827897 Aip10g02357 10 106825867 106827897 ECH
Aip03g03476 03 113536611 113543934 Aip10g02357 10 106825867 106827897 PCT