Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02324 ATGGTGGGAACATCAAGCTCAGACGAAGGTGCAGGGCATCTAGAGCCTCTTGATCCCGATGTGCTTGAAATTGATCCTACCGGTCGCTACATTAAGTATAAAGAAATGATCGGCAAAGGAGCTTTCAAGACTGTTTACAGGGCATTTGATGAAGTCAATGGACTCGAAGTTGCTTGGAGCCAGGTTCGGATTGATGAAGTACTACAGTCACCAGATGACTTAGAGAGGCTGTACTCGGAGGTGCATCTCTTGAGGTCATTGAAACACAATAACATAGTAAGGTTCTACAATTCTTGGATTGACGACAAACACAGGACAGTTAACATGATTACAGAGCTTTTCACCTCGGGGAGCCTCAGACAGTATTGTAAGAGACACAAGAAGATCAACATTAAGGCTATTAAGGGATGGGCCAGACAAATTTTAATGGGTTTAAGCTACCTCCATAATCACAGCCCTCCAATTATACATAGGGACCTGAAATGTGATAATATATTTATAAACGGTCACCAAGGAGAAGTGAAAATTGGAGATCTGGGATTAGCAACTCTCTTGAAAGAGGGTAATGCTAAGAGCGTAATTGGAACTCCGGAGTTTATGGCACCTGAACTGTATGATGAAAGTTACAATGAGCTAGTTGACATATATTCTTTCGGGATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCTTACAGTGAATGTAGAAATTCAGCTCAGATATTCAAGAAAGTTTCAACTGGTGTAAAGCCCTTTGGTCTTTCTAAAGTCAAAGATCCAGATGTAAAATCATTTATTGAGAAATGTCTTGTCCCTGCATCTCAAAGATTGTCAGCTAAGGAGCTTCTCATGGATCCTTTTCTCCAAGCCAATGGTTCAGTAACAAATCGTCCTCTTCCATTACCAGATATTGTTCTTCCCAAATTTGGAGCCTTTGAAAATCGTTGCCTGATGTCAGAAGGTCCTGCTAGTGCACGAATAGGATCCATTCCCATGGATCCTGGTGGTACCAATGAGCTACCAGTGACTGCTGTATTTTATAATAATAATGGTGATGATGGAACACCTTCTCCATGTGTTGAGATACGAAGGCAGAAGGGAAGTGATATTTTCTTTCTGAGAGGCGAAGAAAATGATGAGAACTCGGTGTCTTTAGTTCTCCGAATAGCTGATCAGAGTGGGCGGGCAAGAAATATCCATTTCATATTTTACCTCAGCAGTGATACAGCCATCTCAGTTTCAACGGAAATGGTTGAGCAACTTGATCTTGCTCAGCAGAATGTTAAATTCATAGCTGAGATAATTGACTTGTTATTGATGACTTTGGTTCCTGATTGGAAACCTTGTGTACCGGTTGATCATCTGGCTTCTCCAAATGTTAGATGGACACACTCGAGCCAACAGAACAGCTCTGGGTTTTCAATGTTCAAAAATAGTTCGGAAGGTGGTAGCCAAACTGCAAATAAAAATGCAGGTACAACATTGATTTCAAGGTCAGCACAAAGAGGAAACAATGAGAATACAACTTTTCACAAGGCATGGTCTCAAGCAAGCATTGGTCTTCAAGAAGGAACAATGGCAGATGATTTGCGTTCAGAGATGTCGTATACTTCTGCAACGTCTAACTTAGCCGGCAAGAATTTGTCCATGGTTTCATTGGCTTCATTGGTGTCTGCTAACTCAGAATTTGCAGACTTGGGTCTTACTAGGACGATCGGAGGTAGTCAATCCTCGTTTGATTATGAAACTGAGGTATCACATGACATGGAAAGTGATGGTATGATGAACTCCTCCTCCACTCATCCCCCCAATGTTTCTTCCGTGTCTGAACCTCAGGATGAGTTAAGAATAGAGTTAGCAAAGGTTGAACAGCAATACCAAGATGCAATTAAAGATTTATCAGAAAGGAGATACCTTGCCATAATGGAAACTAGGAGGAGGCTGGCGCAAAAGATGCCATTATAG 1965 0.4163 MVGTSSSDEGAGHLEPLDPDVLEIDPTGRYIKYKEMIGKGAFKTVYRAFDEVNGLEVAWSQVRIDEVLQSPDDLERLYSEVHLLRSLKHNNIVRFYNSWIDDKHRTVNMITELFTSGSLRQYCKRHKKINIKAIKGWARQILMGLSYLHNHSPPIIHRDLKCDNIFINGHQGEVKIGDLGLATLLKEGNAKSVIGTPEFMAPELYDESYNELVDIYSFGMCMLELVTSEYPYSECRNSAQIFKKVSTGVKPFGLSKVKDPDVKSFIEKCLVPASQRLSAKELLMDPFLQANGSVTNRPLPLPDIVLPKFGAFENRCLMSEGPASARIGSIPMDPGGTNELPVTAVFYNNNGDDGTPSPCVEIRRQKGSDIFFLRGEENDENSVSLVLRIADQSGRARNIHFIFYLSSDTAISVSTEMVEQLDLAQQNVKFIAEIIDLLLMTLVPDWKPCVPVDHLASPNVRWTHSSQQNSSGFSMFKNSSEGGSQTANKNAGTTLISRSAQRGNNENTTFHKAWSQASIGLQEGTMADDLRSEMSYTSATSNLAGKNLSMVSLASLVSANSEFADLGLTRTIGGSQSSFDYETEVSHDMESDGMMNSSSTHPPNVSSVSEPQDELRIELAKVEQQYQDAIKDLSERRYLAIMETRRRLAQKMPL 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02324 654 MobiDBLite consensus disorder prediction 471 490 - -
Aip10g02324 654 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 1 651 - -
Aip10g02324 654 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 651 - -
Aip10g02324 654 Pfam Protein kinase domain 33 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02324 654 MobiDBLite consensus disorder prediction 1 20 - -
Aip10g02324 654 SUPERFAMILY Protein kinase-like (PK-like) 33 289 IPR011009 -
Aip10g02324 654 Gene3D - 381 447 - -
Aip10g02324 654 MobiDBLite consensus disorder prediction 589 613 - -
Aip10g02324 654 ProSiteProfiles Protein kinase domain profile. 31 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02324 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Aip10g02324 654 MobiDBLite consensus disorder prediction 590 611 - -
Aip10g02324 654 CDD STKc_WNK 29 288 - -
Aip10g02324 654 Coils Coil 612 632 - -
Aip10g02324 654 SMART serkin_6 31 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02324 654 Gene3D Transferase(Phosphotransferase) domain 1 114 296 - -
Aip10g02324 654 Gene3D Phosphorylase Kinase; domain 1 16 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02324 Aip-Chr10 104781725 104784453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02324 131 506 MAP Kinase Kinase Kinase AT1G49160 61.702 2.95e-164 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aip10g02324 Pkinase 1.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02324 K08867 - gmx:121175054 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02324 10 104781725 104784453 Aip10g02324 10 104781725 104784453 ECH
Aip03g03499 03 114721974 114725761 Aip10g02324 10 104781725 104784453 PCT