Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02304 ATGCCGTCATCGGAGATGAAGGATCGTGCTGATGAGGAGGGGTCGTGCGCGTTGGCAGCAAGGATATTAGCCAAGAAGCCTGTCCACACGCTAGGCTGGGTTTTAGTACTACTAGTCTACTATACTCAAGTCATTACTCACTTGATAGTCGATACTCGTTCCATCATGTCCATGCGCCCATTCCTCCCCAAATGCCTCTTCTTCAGCTCTTCGCCAGCTCGTGCTCTTCTTCTTCTTCCACTTCAACTCAGCCAATTCTCGTCTTCGTCGCATTCGCCTTCGTATCATCCGAGACGGTTAGAGGAGGAGTCACGCCACGTGAGGGTGTCGGTGTGGTGGGACTTCGAGAACTGCCAAGTGCCGAACACCATCAACGTGTCCAAGATCGCCACCGTCATAACGGACGCCGTTAGAGCCAACGGTATTAAGGGGCCCGTCCATATAACGGCCTTCGGCGATGTCTTGCAGCTTTCTAGATCCAACCAGGAGGCACTTTCATACACCGGCATTCATCTTGCCCACGTTCCCAATGGTGGAAAGAATAGTGCTGATAGATCTCTTCTTATTGATCTTATGTGTTGGGTTTCTCAAAACCCGCCACCTGCGCATCTCTTTCTGATTTCTGGGGATAAAGACTTTGCTGGCATATTGCACCGCTTAAGAATGAATAACTACAACATCCTGCTTGCAACTCCAGGATCAGCTTCTGATGTGCTATGCGCTGCAGCAACTATAATGTGGCACTGGCCATCTTTGCTTAAGGGAGAAGAACTTACTGGAAAGCATTTCAATCATCCTCCAGATGGCCCTGTTGGTTCTTGGTATGGAAATTATAAGGTGCCTCTTGAAAATCCCTTCTCAGCTAGTGAGCAGTCTGCATCTTGTCAAAAAGCAGAAAGCTGTGAATCTCCCCCAATTCCTAAGTCAGTTGCAAGGCAGGTTAGGAAAATATTAAGTTCGCATCCAAAAGGGATGTCCATTACAGATTTTCGTGCGGAGTTGGCTAAAAATAATGTGCAATTGGAGAAATCATTCTATGGACAGAAAAAGTTTTCCCGTTTTCTTCTATCAATACCACACGTACAGCTCAAGCATTTAGGTGAAGGTGTTTATTTTGTGTGTTTGGCTCCCTCAGAGTTTCCCAAACCCCTTGCAAGCAATGATGGGCCATCAAAAACACCTGCTGTTGGGAATGAAGCACCTCAAAAGTTGAATGGTGAGAGTAAAAATACGCCTAGAGATGTAGATAGGACGCCTTCAATGCCCTCATTGCATGAAAGGAGTAGTGCGAAGATTGGGAATATGACTGATGCACAATTGTCTAAGGTTCAACTGCCACAAAAAGACAAGGAAGTTTCACGATTTAAGGCAGATAATGAGATTGTAACGCCTGACGAGATAAGTCTCAATAAATCTGGAAAACCTACTTCATCAGATGACCACTCTGCTCAGAACACATTGGTGGAAAACAATCTTGTTGATGATGAATCTGGAAAATATATAGCTGAGTACAAAAATGAGGGGCCAACTAGAGGGGATGCTGATGAGGTTTGTCAAAGCTCTTATTCTTTGCCAGTTGATGACTTCATGGTTGAGAAGAGGCATGGCGGGAGTGTTGAAACTCATAGCAAAAGTTCAATATTTGGTTGGATTAGAAGTTGGTTTCCATTTTGGAAAAGAAATGCTAAATCTGATGATTTAACCACTAATAAGACCAGCATGGATAGTCACTCTGAGTTTGAGGAGCCCAAGTTATCTCAACTGGACATGGCAGTAAGTCATTCGGAGGAGCCCAAGCTATGTCAACCAGAGATGGCTGTAAGTCATTCGGAGGAGCCCAAGCTATGTCAACCAGACATGGCTATAAGTCATTTGGAAGAGCCCAAGCTATCTCAAGCCAACACATCAGAAGTGAACCAGAATGTTGGTCATTCTGACAAGCCCGAGTTATTTTTTAGAGATTCCTTTTGGAATTACATGGAATCTTTTGTTTTTACCACCCAAGGATCAGTTCTCGTCTCCCTGTCAACAAGCAGGTTGGAGGATTTGGCACAAAAATTACAAAAGGGCGGTCCTGCGGTTCTCGAGTCTCTCACTGAAAAGGATATTCTTCAACTGATTGATTTATTAATAGCAGACAAGAAATGGTTGGAGGTAAGCGGCTCCACAAAATATCCATTTAAGGTGACTCGACCAGTTCAGAAGAACTCATCAATGGGCCTTTCTCATGGTGCGAATGGCCTTCGGTCTCTCTTTTTAAATAGAGCATCACAGTCCAACCTGCAGAAATTACTTGAACATGATGCAGAGAAACACAATCAGAATACTCCTCATACTAGTGTTTTGAAACTTGCCACTGAAAAACTATATGCTGAGAGGTCTAGAAATGATATATTAGTAGACTGCCAAAAAGTTGTGGATGAAATATTGAGAATCCACCCAGAGGGATACAATATTGGTTGTTTCCGAAAACTATTTTATGAGATGTGTGGCTATCATATTAATTTACAGAAGCTCGGTTATAAAAATTTGGCATCCTTATTGCAGACAATGCAGGGAGCTAAATTAGAGTCCACTAATATTTTTCCTTCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTGACCGGGAAACTTCAATCCTCAAAACTCAAGTTACCAGGGCTAGTCATGCAGTCACCTACTCAGATAGTGAATTGTCTGGTTCAGCTCCAAAGGATGATAGCATGGACTCTCCATGGGAAGAATTAGGTCCTATTTCTGCCAAAAATTCTGACCAGAGTGATGTGGAATCAGAATTAAGTAGGAATGCCAAAGAACTGGATAATACCTCAAAGTATCCTGATTATGAACCTGTTGGCTTAGATTATGATCCTTCTGAGTCTGAAGAAGATAGTACCTGTTTAACTCAACCAGAAGAGCAAGGAAAGCGAAGATGTAATGAGCAAGACAGTTCTCTTCTCAAAGTTTTGGATTTCTGGCACTGTAGAAAGGAAGGAGAGAATAGTGCAAAGAATTCAGATAGTGTTGACATCTTTAATAATGATTCTCTGAAAAGGATTTTGAATCCATCGGGCAAGTCATCTCAGGGTGCCCTTTCCAAAATTCCTTCAGGGAACTATAGAGAGAAGCATAGTTCTCGAAAGAGCTATTCATTTGTAGCTGATCCACTTTTATCCCCGAAGGACAAACTGATTGATGGGATGCTTGATGGCTTCAAGAAAACAGATGAGACTAAGATGCAAAATTGA 3306 0.4186 MPSSEMKDRADEEGSCALAARILAKKPVHTLGWVLVLLVYYTQVITHLIVDTRSIMSMRPFLPKCLFFSSSPARALLLLPLQLSQFSSSSHSPSYHPRRLEEESRHVRVSVWWDFENCQVPNTINVSKIATVITDAVRANGIKGPVHITAFGDVLQLSRSNQEALSYTGIHLAHVPNGGKNSADRSLLIDLMCWVSQNPPPAHLFLISGDKDFAGILHRLRMNNYNILLATPGSASDVLCAAATIMWHWPSLLKGEELTGKHFNHPPDGPVGSWYGNYKVPLENPFSASEQSASCQKAESCESPPIPKSVARQVRKILSSHPKGMSITDFRAELAKNNVQLEKSFYGQKKFSRFLLSIPHVQLKHLGEGVYFVCLAPSEFPKPLASNDGPSKTPAVGNEAPQKLNGESKNTPRDVDRTPSMPSLHERSSAKIGNMTDAQLSKVQLPQKDKEVSRFKADNEIVTPDEISLNKSGKPTSSDDHSAQNTLVENNLVDDESGKYIAEYKNEGPTRGDADEVCQSSYSLPVDDFMVEKRHGGSVETHSKSSIFGWIRSWFPFWKRNAKSDDLTTNKTSMDSHSEFEEPKLSQLDMAVSHSEEPKLCQPEMAVSHSEEPKLCQPDMAISHLEEPKLSQANTSEVNQNVGHSDKPELFFRDSFWNYMESFVFTTQGSVLVSLSTSRLEDLAQKLQKGGPAVLESLTEKDILQLIDLLIADKKWLEVSGSTKYPFKVTRPVQKNSSMGLSHGANGLRSLFLNRASQSNLQKLLEHDAEKHNQNTPHTSVLKLATEKLYAERSRNDILVDCQKVVDEILRIHPEGYNIGCFRKLFYEMCGYHINLQKLGYKNLASLLQTMQGAKLESTNIFPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDRETSILKTQVTRASHAVTYSDSELSGSAPKDDSMDSPWEELGPISAKNSDQSDVESELSRNAKELDNTSKYPDYEPVGLDYDPSESEEDSTCLTQPEEQGKRRCNEQDSSLLKVLDFWHCRKEGENSAKNSDSVDIFNNDSLKRILNPSGKSSQGALSKIPSGNYREKHSSRKSYSFVADPLLSPKDKLIDGMLDGFKKTDETKMQN 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02304 1101 MobiDBLite consensus disorder prediction 422 443 - -
Aip10g02304 1101 MobiDBLite consensus disorder prediction 911 1000 - -
Aip10g02304 1101 MobiDBLite consensus disorder prediction 1037 1065 - -
Aip10g02304 1101 CDD PIN_limkain_b1_N_like 108 232 - -
Aip10g02304 1101 ProSiteProfiles OST-type HTH domain profile. 798 902 IPR025605 -
Aip10g02304 1101 MobiDBLite consensus disorder prediction 447 461 - -
Aip10g02304 1101 MobiDBLite consensus disorder prediction 947 964 - -
Aip10g02304 1101 CDD LOTUS 801 851 - -
Aip10g02304 1101 Gene3D - 793 859 IPR041966 -
Aip10g02304 1101 MobiDBLite consensus disorder prediction 383 484 - -
Aip10g02304 1101 Pfam NYN domain 108 243 IPR021139 GO:0004540
Aip10g02304 1101 MobiDBLite consensus disorder prediction 465 484 - -
Aip10g02304 1101 Gene3D - 100 249 - -
Aip10g02304 1101 MobiDBLite consensus disorder prediction 1037 1054 - -
Aip10g02304 1101 PANTHER LIMKAIN B LKAP 67 1036 IPR024768 GO:0005777|GO:0010468|GO:1903231
Aip10g02304 1101 CDD LOTUS 307 375 - -
Aip10g02304 1101 ProSiteProfiles OST-type HTH domain profile. 306 377 IPR025605 -
Aip10g02304 1101 PANTHER EMB|CAB71880.1 67 1036 - -
Aip10g02304 1101 Pfam OST-HTH/LOTUS domain 803 853 IPR025605 -
Aip10g02304 1101 Pfam OST-HTH/LOTUS domain 307 371 IPR025605 -
Aip10g02304 1101 Gene3D - 307 374 IPR041966 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02304 107 255 C2H2 Transcription Factor Family AT5G61190 45.638 8.38e-37 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02304 - - ahf:112782923 1918.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02304 10 103134789 103141667 Aip10g02304 10 103134789 103141667 ECH