Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02300 ATGGAGCTTCATATTTCAGATTTTGGTACTGCCAACATCAGGAACCTAGCTGAGGATTCTTATACTCATTCTGATTTCCCTTGGCAAAAGCTTTCAGCACGTATAGCTGGTACTACTGGCTATATGGCACTAGAGTGTGCATATGCAACAGTGCCAAGCAGAACTTTTGACGTATATAGCTATGGAGTAGTGTTGCTTGAGCTAATAACCGGAAAAAGAGCATTAGTTTATGAAAATAAACATATAGTGAGTTGGGTTAGATCTGTCTCGGATGATAAAACAAACAAAATTGACAAGATTGTTGTTTCATACCTTGCAGCTTCATTTCCCAATTCAGCAGTGTTGGAAAGCCAAGTAACTGCATTGCTTTCATTGGAATTGAGATGCACATAG 393 0.3893 MELHISDFGTANIRNLAEDSYTHSDFPWQKLSARIAGTTGYMALECAYATVPSRTFDVYSYGVVLLELITGKRALVYENKHIVSWVRSVSDDKTNKIDKIVVSYLAASFPNSAVLESQVTALLSLELRCT 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02300 130 PANTHER OS08G0446200 PROTEIN 1 130 - -
Aip10g02300 130 Gene3D Transferase(Phosphotransferase) domain 1 1 130 - -
Aip10g02300 130 SUPERFAMILY Protein kinase-like (PK-like) 2 80 IPR011009 -
Aip10g02300 130 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02300 130 Pfam Protein kinase domain 3 85 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02300 130 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02300 Aip-Chr10 103096615 103097172 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02300 1 130 Receptor kinase-like Gene Family AT1G17750 45.588 5.26e-22 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip10g02300 Pkinase 3.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02300 - - aip:110268450 237.269