Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02296 ATGACTAGTAGTGTCACACTTCTCTTCTTGATTCTTTGCTTCTCTAACTTCTTGTATAATGCTTCTGCTCTTGTCTCTGATGATGTCACTCTCTGTTCACTCTTGACTCATTGGACCTTTGTTCCACTCATCATAAACTCCACTTGGAATGGCTCTGATTCGGTTCTGTGCTCGTGGATTGGAGTCCAATGTAACCATGCCTATGATGTGATCTCCCTTAACCTCAGTGATCTTGGGATTCAAGGTCAACTTGGACCAGAAATAGGACAATTACATCGCTTGCAGACCCTTGTGTTGTCGAATAATGGTTTCTTAGGAAAGGTACCTTCAGAGCTAAGTAACTGTACTTTGCTTCAGGTCTTAGACTTTTCTAATAACAGCTTTTGCGGACTGATATCAAATAGCTTCAAGAAGTTGCAAAGCTTACGCAGCATGAATTTGTCGTCTAATCTAGTGAATGGTGCGATTCAAGATTCCTTGTTTCAAATTCGTCAGCCTGAAGAAATGAACCTTCACAATAACCATCTCAGTGGTCCTATACCAACCGGTATTGGGAACTTAACTGAGCTGTTAAGGTTACACTTACATGGTAATCGGTTGTCAGGTACGATTTCTTCATCCATTGGTAATTGCAGTAAACTAGAGGAATTGTTTCTGAATGAGAATAGATTGAGTGGGGAACTATCTTTGGAGATGGCAAAGCTCAAGAATCTAAAGACTATGTCTTTGTTTGACAACCAGTTCTCAGGAGTCATTCCTCAAGACTTGGGAATCAATAGCAGCATAGTGAAACTGGACTTTACAAATCTTCTACCAAATCTTTGCTTTCGAAAGAAGTTAAAAGTGCTGAACATGGGATCTAATCGACTTCAAAGTAACATACCTTCTGATGTAGGAAGTTCCTTCCCATCAAGTCCGAGGAACTGGACAGGGATAACCACATTAATTTTAAGAGAGAATCATTTTATAGGTGGTATCCCGAGCTTTTTCTCAGAACGTAGCAAGCTTCGTGAACTACAACTTAGTGGAAATTTAATTGGAGGAACAATTCCTCCATCATTGGAAAAACTACAGAAGCTGTTATATGGGTTGAATTTGAGTAGCAATGGATTGACAGGAAACATAGATGTTCTTGCTCAACTAGCATTGATTGAGATCAATATTTCATATAATTTCTTGTATGGTCTTGTTCCAACATCCCTCTGCAAGTTTTTGGATTCCTCATCATCTTCTTTCTTGGGCAATCCCTATTTAAATGTCAGTTGTTCTCCTTCTAGTGGCCTGGATCAGACCAACACTTGTAATTTGAAGCCATGCTCCTATCAATCAACTTATCACAAAGTCATCAGTGCATTGGGGGGCCATGGCCCATACAGGTCCCCTCCTAAATCCACCTCTAATGGTATGGTCTTATCTAAGTACATAAAGAATGGAAGCCTCCATGATATTTTGCATGAGAAATATCCTTTACCACCCTTAAATTGGAGTATACGGCTTAACATCGCTGTTGGAATTGCACATGGACTAAAATATCTGCATTATGACCACACCACACCCATAGTACACCGAGACATAAAGCCACATAATATACTTCTTAATGATCAGATGAAGCCTCTTATATCTGATTTTTGTACTTCCTTCTATAGGAACCTTGCTGAGCATTCTTATTGTCAATCTCATTCTTGGAAAAAGCTTTTAACATATGTTGTAGGTACTGCTGGTTATATCGCACCAGAGAATGCATATGTAATAGTGCAGAGCAAAAAGTCTGATGTATACAGCTATGGGGAGGTTGTTGATCTAGACATTGCAAATGCATTTCCCAATTCAAGAGTATTGGCAAGGCAAGTCACTGAGGTGCTTTTGTTGGCATTAAGATGTACTAAGAGGAAGCCTCGTGAGAGACCAACCATGAAAGACATTACTAGCTTCTATCAGAAAAACATATTCAAGTTGAGTTGCGATGATGTGGATATGGTTAATGAAAATATTGTTAATGTGAATGAACCTCAAGATTCTAATGGTTTCATCTGGTGGTGGCAAGATCTTAGTCAATCTGAAGATTCTTTGGTTGATTGGAATGTGATGGCTACAACTAAAACTGTTGTTGATGGATTCATAGTTAAATTAATAGGCAATGAAAAGGTAACTTCAGAGTTAAGTAACTATAGTTTGCTTCAGCTCTTAGACCTTTCTAATAACAGCTTTAGTGGACAGATACCATATAGCTTCAAGAAGTTGCAAAATCTGCAGTATATGAGCTTGTCATTCAATCTGTTGAGTGGTGAGATTCCAGATTTCTTGTTTCAAATTCCTCAACTACAAGAAGTGAACCTTCACTCTAACCATCTCAGTGGTCCTATCCCGACCCGCATAGGCAACTTGACTGAGCTGTTGAGCTTGGGAATCAATAATAGCCTAGTGAAGCTGGACCTTACAATGAATGATTTCATTGGTAATATCCCACCCAATCTCTGCCTTGAAAAACAATTACGTGTTTTGAACATGGGATTCAATAAAATTCAAGGTAGCTTACCTTCTGAGGTAGGAAGATGTGAAACTCTAAACATGTTAATTCTTAGTGAGAATCATTTAACCGGCTCTCTTCCGGAGTTCGCAAGTAACCTGAACCTCAAGATTATGGACATGAGCAGGAACAGAATTGGTGGAACTATACCATCAAGTTTGGAGAAGTGCACTAATCTTATCGAAATAAATTTGTTAATGAACAAATTTATTGGCATCATACCATCACAGCTTGGAATGCTTCTAAATCTTGAGGTTTTAAATCTTGCACATAACAGCTTGGAAGGTACTCTGCCAAATCAGCTGTCAAATTGTGCTAAAATGGATAGTTTTGATGTTGGATTCAATTCCCTCAATGGATCATTCCCATCAAGTTTACAGAGTTGGACGGATTTAACAACATTGATTTTAAGAGAGAATCGTTTTACAGGGAGTATCCTAACTGTTCTTTCAGAATTTAACAAGCTCCATGATTTACAGCTTGGCGGAAATTTGTTTGGAGGAAAAATTCCTCCATCGTTAGGAAAGTTGAAGAATCTGATCTATGGATTAAATCTAAGTGCTAATGGATTGACAGGTGAAATTCCATTTGAAATTGGGAAGCTAAAAGTACTGTCTAGTCTGGATTTATCCTCAAACAATTTGACAAGAAGCATGGATGTTCTTGGTGAACTTTCGTTGGACAACTTGAATATTTCATACAATTTCTTGCATGGTCCAGTATCAAAAACTCTGATGAATTTCTTAAATTCCTCACCATCTTCATTCTTGGAAAATCCATATCTCTGTGTCAGTTTTTCAGCTTCTCATAGGTCAAATCGCACCAAAGCTTGTTACTTGAAGCCATCTGTCTACAAATCAACTTATCATTTAGGTATCAGTATAAGTGCAATGGTGATGATAGAACTTGGTTCCACAATATTGGTTTCTGGCATGCTAATAGCACTAGTTTTTTGCCGGTTAAATGCCTATGATTCAATGCTTTCACATGGTGAAAATAAAAAAGAAGATATTAACTTGGGTTTACCTTGGAATTGTGGCATGCTCAAGGATGCTATGATCAAAGTAGATGATGGGTGTATTGTTGGCAGAGGAGCCTATGCAATAGTTTATAAAGTCCACAATCAAGGTCTAGTTCTTACTGTACAGAAGAGTGTATTTAGAGGAAAGGACAACAAGCGCTTAGGAATTATGAAAAGAGAAATCAAAACCCTCTATATGATTAAGCACAGAAATTTGGTAAGAATCTTGGGATACAGTGTGGCTAAGGACTATGGTGTAATGTTCACTCACTACATGGAAAATGGAAGCCTTCATGATATTTTGCATAGGAACATTCTATCACCACCCTTAATCTGGAATGTTCGGCTTAAGATAGCTGATGGAATTGCACAGGGACTAAAATACCTGCATTATGACTGCGATCTACCAATAGTGCACCGAGACATCAAAGCACAGAATATACTCCTTGATGTTGAGATGGAGCCTCATATTTCAAATTTTGGTACTGCCAACATCAGGAACCTAACTGAGGATTCTTATACTCATTCTAATCTCCCTTGGCAAAAGCTTTCAGCACGTATAGCTGGTACTGCTGGCTATATGGCACCAGGTGTAGCACCACAATTACCATTCAATAATGAACCAGATATCAGTACTAGTCCAGTTTACAACACTCAGGATCAGGGAGACTCCTATGTGCATGAAGAAAGTAATGAACCACAAGATGTCTATACTTTAAATGATTTGAGGCTTGTGTCTACACCTAAAATTGGTGTTGATGGACTCATAATTAAAGTAATAGGCAATGGTAAGTTACATGTTGAACAATTTACAGTGAAAACTACACTGGTTGTTCCTAAAGTGACCTACACTTGGCCTTATTTGAAGTTCCTTCCCACTGTGACTGGACCAGTAGTTACAATACCTTTCAACTGGTTTTTCCTCTCTTCTTGGGCTCAATATATGTACCAGAAGAGTTCTTTAAAATTATACCTCAATTTCTTCTTTATAGGCACCTATCAAGGACACTTCTACATGTTGTGTAAACTCTGA 4581 0.3829 MTSSVTLLFLILCFSNFLYNASALVSDDVTLCSLLTHWTFVPLIINSTWNGSDSVLCSWIGVQCNHAYDVISLNLSDLGIQGQLGPEIGQLHRLQTLVLSNNGFLGKVPSELSNCTLLQVLDFSNNSFCGLISNSFKKLQSLRSMNLSSNLVNGAIQDSLFQIRQPEEMNLHNNHLSGPIPTGIGNLTELLRLHLHGNRLSGTISSSIGNCSKLEELFLNENRLSGELSLEMAKLKNLKTMSLFDNQFSGVIPQDLGINSSIVKLDFTNLLPNLCFRKKLKVLNMGSNRLQSNIPSDVGSSFPSSPRNWTGITTLILRENHFIGGIPSFFSERSKLRELQLSGNLIGGTIPPSLEKLQKLLYGLNLSSNGLTGNIDVLAQLALIEINISYNFLYGLVPTSLCKFLDSSSSSFLGNPYLNVSCSPSSGLDQTNTCNLKPCSYQSTYHKVISALGGHGPYRSPPKSTSNGMVLSKYIKNGSLHDILHEKYPLPPLNWSIRLNIAVGIAHGLKYLHYDHTTPIVHRDIKPHNILLNDQMKPLISDFCTSFYRNLAEHSYCQSHSWKKLLTYVVGTAGYIAPENAYVIVQSKKSDVYSYGEVVDLDIANAFPNSRVLARQVTEVLLLALRCTKRKPRERPTMKDITSFYQKNIFKLSCDDVDMVNENIVNVNEPQDSNGFIWWWQDLSQSEDSLVDWNVMATTKTVVDGFIVKLIGNEKVTSELSNYSLLQLLDLSNNSFSGQIPYSFKKLQNLQYMSLSFNLLSGEIPDFLFQIPQLQEVNLHSNHLSGPIPTRIGNLTELLSLGINNSLVKLDLTMNDFIGNIPPNLCLEKQLRVLNMGFNKIQGSLPSEVGRCETLNMLILSENHLTGSLPEFASNLNLKIMDMSRNRIGGTIPSSLEKCTNLIEINLLMNKFIGIIPSQLGMLLNLEVLNLAHNSLEGTLPNQLSNCAKMDSFDVGFNSLNGSFPSSLQSWTDLTTLILRENRFTGSILTVLSEFNKLHDLQLGGNLFGGKIPPSLGKLKNLIYGLNLSANGLTGEIPFEIGKLKVLSSLDLSSNNLTRSMDVLGELSLDNLNISYNFLHGPVSKTLMNFLNSSPSSFLENPYLCVSFSASHRSNRTKACYLKPSVYKSTYHLGISISAMVMIELGSTILVSGMLIALVFCRLNAYDSMLSHGENKKEDINLGLPWNCGMLKDAMIKVDDGCIVGRGAYAIVYKVHNQGLVLTVQKSVFRGKDNKRLGIMKREIKTLYMIKHRNLVRILGYSVAKDYGVMFTHYMENGSLHDILHRNILSPPLIWNVRLKIADGIAQGLKYLHYDCDLPIVHRDIKAQNILLDVEMEPHISNFGTANIRNLTEDSYTHSNLPWQKLSARIAGTAGYMAPGVAPQLPFNNEPDISTSPVYNTQDQGDSYVHEESNEPQDVYTLNDLRLVSTPKIGVDGLIIKVIGNGKLHVEQFTVKTTLVVPKVTYTWPYLKFLPTVTGPVVTIPFNWFFLSSWAQYMYQKSSLKLYLNFFFIGTYQGHFYMLCKL 1526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02296 1526 ProSiteProfiles Protein kinase domain profile. 336 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02296 1526 SUPERFAMILY RNI-like 70 416 - -
Aip10g02296 1526 Gene3D Ribonuclease Inhibitor 299 425 IPR032675 -
Aip10g02296 1526 SUPERFAMILY Protein kinase-like (PK-like) 467 643 IPR011009 -
Aip10g02296 1526 PANTHER OS08G0446200 PROTEIN 8 212 - -
Aip10g02296 1526 SUPERFAMILY RNI-like 729 1103 - -
Aip10g02296 1526 PANTHER OS08G0446200 PROTEIN 467 598 - -
Aip10g02296 1526 PANTHER OS08G0446200 PROTEIN 597 655 - -
Aip10g02296 1526 PANTHER OS08G0446200 PROTEIN 178 300 - -
Aip10g02296 1526 PANTHER OS08G0446200 PROTEIN 301 451 - -
Aip10g02296 1526 Gene3D Transferase(Phosphotransferase) domain 1 441 672 - -
Aip10g02296 1526 PANTHER OS08G0446200 PROTEIN 800 1385 - -
Aip10g02296 1526 SMART LRR_typ_2 187 211 IPR003591 -
Aip10g02296 1526 SMART LRR_typ_2 334 357 IPR003591 -
Aip10g02296 1526 SMART LRR_typ_2 829 852 IPR003591 -
Aip10g02296 1526 SMART LRR_typ_2 747 771 IPR003591 -
Aip10g02296 1526 SMART LRR_typ_2 278 301 IPR003591 -
Aip10g02296 1526 SMART LRR_typ_2 139 163 IPR003591 -
Aip10g02296 1526 SMART LRR_typ_2 91 115 IPR003591 -
Aip10g02296 1526 SMART LRR_typ_2 923 947 IPR003591 -
Aip10g02296 1526 SMART LRR_typ_2 1044 1067 IPR003591 -
Aip10g02296 1526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Aip10g02296 1526 Pfam Protein kinase domain 1203 1384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02296 1526 Pfam Protein kinase domain 467 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02296 1526 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 597 655 - -
Aip10g02296 1526 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 715 804 - -
Aip10g02296 1526 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 301 451 - -
Aip10g02296 1526 Gene3D Transferase(Phosphotransferase) domain 1 1192 1393 - -
Aip10g02296 1526 SUPERFAMILY Protein kinase-like (PK-like) 1200 1391 IPR011009 -
Aip10g02296 1526 Pfam Leucine Rich Repeat 118 139 IPR001611 GO:0005515
Aip10g02296 1526 Pfam Leucine Rich Repeat 925 947 IPR001611 GO:0005515
Aip10g02296 1526 PANTHER OS08G0446200 PROTEIN 715 804 - -
Aip10g02296 1526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1320 1332 IPR008271 GO:0004672|GO:0006468
Aip10g02296 1526 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 8 212 - -
Aip10g02296 1526 Gene3D Ribonuclease Inhibitor 806 1115 IPR032675 -
Aip10g02296 1526 Gene3D Ribonuclease Inhibitor 36 298 IPR032675 -
Aip10g02296 1526 Pfam Leucine rich repeat 726 784 IPR001611 GO:0005515
Aip10g02296 1526 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 800 1385 - -
Aip10g02296 1526 ProSiteProfiles Protein kinase domain profile. 1198 1526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02296 1526 Gene3D Ribonuclease Inhibitor 673 805 IPR032675 -
Aip10g02296 1526 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 467 598 - -
Aip10g02296 1526 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 178 300 - -
Aip10g02296 1526 SMART serkin_6 1198 1454 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02296 Aip-Chr10 103055853 103064266 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02296 467 642 Receptor kinase-like Gene Family AT1G17750 38.356 2.78e-35 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip10g02296 Pkinase 3.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02296 - - ahf:112786140 1021.92