Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02275 ATGGCAGGGAAGAAGGCGGCGCCGGTGGCGGAGGAGGATGACGCAAGGAGCAAGTATGGGGAGATGATGGAGATGAAGATGGTGGTGCAGCATAAGGACTTGAAAGAGATCGTGGAAACCATTAAAGAGAGCTTTGACAAAGCTGCGGTGGCCGGAGATCAGGTCTCTGAGATGCTCCAGATCAATCAGGCACAACTCGATCGCAGTTTCAAGCAATTGAGGAGTTTGTTCTCTTCTTCTTGTTTAATCGTAGACCATAACGCGTCCCTCCCTCCTCCTCCATCTGCGACGCCGTTGTCCTGCCCTGCCAATCTGCCATCCTTCTCACGCAACCGCGGTGGTGGCACGTTCCTCGTCACCAAGTCGCGAGTCCCTACCGCGGCGCTCTTCTCCGCGGTAAGAGTAAAGGACATCATTTTGAAGCGGAAGATCGGAAAGGGATCGTTCTCAGCGGTGTGGAGGGCAGAGCATAGAGGCACCGGCGAAGAGGTGGCAGTGAAACAGGTCTTCCTCTCCAAACTCAGCCCTCGTCTTAAGTCATCGTTCCACTGCGAGCTCAATTTCTTGTCCTCCGTCAACCACCCCAACATCGTTCGCCTCCTTGATTTCTTCCAGTATGATGGATGTGCGTACTTAGTGATGGAGTTCTGTGCTGGAGGGAACCTTGCTTCTTATATCCGATCCCATGGGAGAGTTCAACAACAAACTGCCAGAAGATTCATGCAGCAGCTTGGTTCTGGTATGAAAATATTACAAAGTTATGGAATCATTCATAGAGACTTGAAACCAGAGATTAGAGCACCTCATCATGACTCAAAATCTAATGAACAAGAGATCAACTCAACTCAAGAATGGCATATACTGAACCTTACTCGAATCATAAGCTATGCCCTTTTTCCAAGATTCAGCCCAAATAGAAAGTTCCTTGTGTTTTTATCTGCGAAAATGTATAAGGTTGATATGGTTGTTGTTACTGATGGGAGCAAAATTTTGGGACTTGGAGATTGGAGTTCATGGAAATGGCAATCCATTGGGAAGCTTGATCTGTATGTTGCAGCTGCTGGGATAAATCCTAAAGGAGTTCGTGCCCTGGGATGA 1098 0.4827 MAGKKAAPVAEEDDARSKYGEMMEMKMVVQHKDLKEIVETIKESFDKAAVAGDQVSEMLQINQAQLDRSFKQLRSLFSSSCLIVDHNASLPPPPSATPLSCPANLPSFSRNRGGGTFLVTKSRVPTAALFSAVRVKDIILKRKIGKGSFSAVWRAEHRGTGEEVAVKQVFLSKLSPRLKSSFHCELNFLSSVNHPNIVRLLDFFQYDGCAYLVMEFCAGGNLASYIRSHGRVQQQTARRFMQQLGSGMKILQSYGIIHRDLKPEIRAPHHDSKSNEQEINSTQEWHILNLTRIISYALFPRFSPNRKFLVFLSAKMYKVDMVVVTDGSKILGLGDWSSWKWQSIGKLDLYVAAAGINPKGVRALG 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02275 365 SUPERFAMILY Protein kinase-like (PK-like) 125 264 IPR011009 -
Aip10g02275 365 ProSitePatterns Protein kinases ATP-binding region signature. 144 167 IPR017441 GO:0005524
Aip10g02275 365 Pfam Malic enzyme, N-terminal domain 314 360 IPR012301 GO:0004471
Aip10g02275 365 Pfam Protein of unknown function (DUF632) 34 78 IPR006867 -
Aip10g02275 365 Pfam Protein kinase domain 141 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02275 365 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 129 264 IPR045269 GO:0004674|GO:0006914
Aip10g02275 365 ProSiteProfiles Protein kinase domain profile. 138 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02275 365 Gene3D - 283 363 IPR037062 GO:0004471
Aip10g02275 365 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 129 264 - -
Aip10g02275 365 Gene3D Transferase(Phosphotransferase) domain 1 132 264 - -
Aip10g02275 365 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 312 360 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02275 Aip-Chr10 101876440 101880533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02275 140 264 CBL-interacting serine-threonine protein kinases AT2G30360 37.795 2.32e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Aip10g02275 Pkinase 2.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02275 - - aip:107621035 527.324