Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02253 atggtgaaACCAAATTCGAAGGCTGTTGGACCCAATGGAGAGATCTTTAATGCAAAAGAAGCATTCCATGTGGCCAGAATCGGATCCAATTTCTTCGATTTGCAACCTAAAGAAGGCCTTGCACTAGTGAATAGAACTACTGTTGGTTCTAGACTAGCCTCAATTGTCCTATTTGAGGCTAATATCCTAGTTGTCTTGTTGGAGGTTCTTTCGGCCATATTCGCGGAGGTGATGCAGGGGAAGCCAGAGTTCACTGATCATTTGACACACAAATTGAAGCACtga 285 0.4211 MVKPNSKAVGPNGEIFNAKEAFHVARIGSNFFDLQPKEGLALVNRTTVGSRLASIVLFEANILVVLLEVLSAIFAEVMQGKPEFTDHLTHKLKH 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02253 94 Gene3D - 1 46 IPR024083 -
Aip10g02253 94 PANTHER HISTIDINE AMMONIA-LYASE 2 94 IPR001106 -
Aip10g02253 94 Pfam Aromatic amino acid lyase 12 94 IPR001106 -
Aip10g02253 94 PANTHER PHENYLALANINE AMMONIA-LYASE 2 94 - -
Aip10g02253 94 SUPERFAMILY L-aspartase-like 4 94 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02253 Aip-Chr10 101015684 101016071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02253 3 94 Monolignol Biosynthesis Gene Families AT2G37040 73.913 2.11e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02253 K10775 - gmx:100811101 153.68